DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and Cplx4

DIOPT Version :10

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_038952907.1 Gene:Cplx4 / 361342 RGDID:1307643 Length:166 Species:Rattus norvegicus


Alignment Length:72 Identity:20/72 - (27%)
Similarity:34/72 - (47%) Gaps:9/72 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EDRRKEK---HRKMEEEREKMRQDIRDKYNIKKK---EEIVEAAPQEEPNPLMRKKKTPEELAAE 108
            |.:|.|:   ..:.:.||..:|..:||||.:.|.   |..::.|..:...|...:|...|:   :
  Rat    59 ESKRMERDAAFTQKKAERACLRVHLRDKYRLPKSEMDETQIQLAGDDVDLPEDLRKMVDED---Q 120

  Fly   109 AEQEELD 115
            .|:||.|
  Rat   121 DEEEEKD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:461755 20/72 (28%)
Cplx4XP_038952907.1 Synaphin <58..146 CDD:461755 20/72 (28%)

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