DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and Cplx4

DIOPT Version :9

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_663468.1 Gene:Cplx4 / 225644 MGIID:2685803 Length:160 Species:Mus musculus


Alignment Length:124 Identity:36/124 - (29%)
Similarity:55/124 - (44%) Gaps:15/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFIAKQMVGNQLSAVKGAVGG------DGG--DDGDDKEKAEEEERERQEAIKEAEDRRKEKHRK 59
            ||..|.|:.||:..: |..||      :||  |....|....||..|.|:.:.|.:..|.....:
Mouse     2 AFFVKNMISNQVKNL-GFGGGSEEKKEEGGTSDPAAAKGMTREEYEEYQKQMIEEKMERDAAFTQ 65

  Fly    60 MEEEREKMRQDIRDKYNIKKK---EEIVEAAPQEEPNPLMRKKKTPEELAAEAEQEELD 115
            .:.||..:|..:||||.:.|.   |..::.|..:...|...:|...|:   :.|:||.|
Mouse    66 KKAERACLRVHLRDKYRLPKSEMDETQIQLAGDDVDLPEDLRKMVDED---QDEEEEKD 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:283491 36/124 (29%)
Cplx4NP_663468.1 Synaphin 1..140 CDD:399088 36/124 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..44 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845496
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16705
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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