DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and Cplx1

DIOPT Version :10

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_031782.3 Gene:Cplx1 / 12889 MGIID:104727 Length:134 Species:Mus musculus


Alignment Length:140 Identity:57/140 - (40%)
Similarity:74/140 - (52%) Gaps:15/140 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FIAKQMVGNQLSAVKGAVGGDGGDDGDDKEKAEEEERERQEAIKEAEDRRKEKHRKMEEEREKMR 68
            |:.||.:|.....:...:|||...|.|    |.::|.|||||:::||:.||.|:.|||.|||.||
Mouse     3 FVMKQALGGATKDMGKMLGGDEEKDPD----AAKKEEERQEALRQAEEERKAKYAKMEAEREVMR 63

  Fly    69 QDIRDKYNIKKKEE-IVEAAPQEEPN---PLMRKKKT-PEELAAEAEQEELDDFTSKSLLPLSSA 128
            |.|||||.|||||| ..||....|.|   .|.|.||. |.....|.|:|:      :|:|.....
Mouse    64 QGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEPEEED------ESILDTVIK 122

  Fly   129 VEPGSASGIY 138
            ..||....::
Mouse   123 YLPGPLQDMF 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:461755 54/124 (44%)
Cplx1NP_031782.3 Synaphin 1..133 CDD:461755 57/140 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60 25/60 (42%)
Interaction with the SNARE complex. /evidence=ECO:0000250 48..70 15/21 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..114 16/45 (36%)

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