DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment disco-r and Bnc1

DIOPT Version :9

Sequence 1:NP_001259598.1 Gene:disco-r / 64875 FlyBaseID:FBgn0285879 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001102386.1 Gene:Bnc1 / 365299 RGDID:1309042 Length:990 Species:Rattus norvegicus


Alignment Length:872 Identity:196/872 - (22%)
Similarity:278/872 - (31%) Gaps:345/872 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 TPTHDPNP--MNP----LSDLQNMQPFDFRKISSAAALGAFGGPLPLPQSPTEFGQHHHHSQQQQ 319
            ||....||  |:|    :|::..|.||.|......|.:|:.         |.::.......|.:.
  Rat   219 TPVDKGNPSSMHPFENLISNMTFMLPFQFFNPLPPALIGSL---------PEQYVLEQGQDQSRD 274

  Fly   320 HQHHLHRNQFFNAMAMAYHLPPPPPPPPPDSRSPPSPPPGVGQYQHQAGSGSGSGSGSGSGSSSG 384
            .:..||                   .|..||....|.|..|.:.|                    
  Rat   275 PKQDLH-------------------GPFSDSGFLTSTPFQVEKEQ-------------------- 300

  Fly   385 AGSVDDSAGKQQRNSDKVSASGSCSSSQRMTRLALS--SNMRSSRKTPHSPGGGGAGGNGGSVGG 447
            ..|..| |..|:.:|..:|.|.|.|.:.::.|..||  :.|:..|                    
  Rat   301 CLSCPD-AVTQKEDSAHLSDSSSYSIASKLERTQLSPEAKMKPER-------------------- 344

  Fly   448 GGGKRQWGSMPANLGTQFINPVTGKK-RVQCNVCLKTFCDKGALKIHFSAVHLREMHKCTVDGCS 511
                               |.::.|| ||.|..|.|||.|||.||||::||||:..||||::||:
  Rat   345 -------------------NSLSAKKGRVFCTACEKTFYDKGTLKIHYNAVHLKIKHKCTIEGCN 390

  Fly   512 MMFSSRRSRNRHSANPNPKLHSPHLRRKISPHDGRSAQPHPLLLQAPNGLMAGLAPFGSFPLLTP 576
            |:|||.||||||||||||:||.|..|.                                    ..
  Rat   391 MVFSSLRSRNRHSANPNPRLHMPMNRN------------------------------------NR 419

  Fly   577 PPDLRHHAMGGSGAGSGAGVGALELKHGQDYLQRSYLDAGRFEGQRRKLAMENEHTEDEDDDEIL 641
            ..|||:               :|.|...:.|.:                                
  Rat   420 DKDLRN---------------SLNLASSETYKR-------------------------------- 437

  Fly   642 EVGIHMAGDDDDDEADGDEDEDDDDPDGIVVVGDEIDSMPLDHENDNDNENENDESDERSTSAVS 706
                                      .|..|:..:...:|         .......|.:...|.|
  Rat   438 --------------------------PGFTVMSPDCGPLP---------GYTGSVEDSKGQPAFS 467

  Fly   707 SLSQTKEQSSPGKVVQSGLEECHTYAHAHAHALTHGHAHSLG--HAHALAQMAA---------NK 760
            |:.|........|.||..|....:.|.....|.|.|...||.  .:....|:.:         .|
  Rat   468 SIGQNGVLFPNLKTVQPVLPFYRSPATPAELANTPGMLPSLPLISSSIPEQLVSTDVPFDALPKK 532

  Fly   761 RKRKSQNPVRCPVQ----SDENSGENSIDYDVAADLSIKKVRLPAQAAASAKESEVGESTKSIPS 821
            :.|||..|::...:    :||.....|.|.||           |.|..:..:..:....:..:|.
  Rat   533 KSRKSSMPIKIEKEAVEIADEKRHSLSSDDDV-----------PLQVVSEDEPEDSSPQSDRVPE 586

  Fly   822 PPLTPYGDLRPVGLCIKTEQDHEQELDQEQGQERKREQEQEPEP---------DPVATASKSEMK 877
            ...|..|...|:                .|| ||....|...||         ....|..:||.|
  Rat   587 EQRTQLGLEEPL----------------PQG-ERACHLESVIEPHGAISRTLEQTTLTERESEQK 634

  Fly   878 LEEQETRPADKEDDNEEDEQVSP---PVVTTLDLSRAAAAIKLEPLEEINYEADENRYVRIKQEL 939
            :......|.:.|.|..| ...:|   |.:...|                        |:.::|.|
  Rat   635 VALSSVMPREVEHDGHE-RHFTPGLGPQIPFPD------------------------YMELQQRL 674

  Fly   940 MGGDESLAEESSDKTANHNNNNNNNNNININNSVRLESDNGLEASELEEREPEPETEIEPEHEHE 1004
            :.|                         .:..::   |:.|:....|||.:       |..|..|
  Rat   675 LAG-------------------------GLFGAL---SNRGMAFPFLEESK-------ELGHLSE 704

  Fly  1005 HEPEPETEVEVPEVPIDKENPLKCTACGEIFQNHFHLKTHHQSVHLKLHHKCNIDGCNAAFPSKR 1069
            |....:.|          |...:|..|.:.|:|...:|||.:|.|.:..|.|.:|||.|||.|:|
  Rat   705 HALVRQKE----------ETRFQCDICKKTFKNACSMKTHEKSTHARETHACTVDGCGAAFLSRR 759

  Fly  1070 SRDRHSSNLNLHRKLLS-----TSDDH 1091
            |||||||||:||:|:|:     ||:||
  Rat   760 SRDRHSSNLSLHQKVLNEEALETSEDH 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
disco-rNP_001259598.1 C2H2 Zn finger 1028..1053 CDD:275370 9/24 (38%)
C2H2 Zn finger 1056..1083 CDD:275370 20/26 (77%)
Bnc1NP_001102386.1 C2H2 Zn finger 356..377 CDD:275368 13/20 (65%)
C2H2 Zn finger 384..402 CDD:275368 12/17 (71%)
C2H2 Zn finger 718..739 CDD:275368 8/20 (40%)
C2H2 Zn finger 746..774 CDD:275368 20/27 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352833
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D59377at33208
OrthoFinder 1 1.000 - - FOG0002551
OrthoInspector 1 1.000 - - mtm9145
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.040

Return to query results.
Submit another query.