DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2D and AT1G71350

DIOPT Version :9

Sequence 1:NP_477481.1 Gene:eIF2D / 64874 FlyBaseID:FBgn0041588 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_177291.2 Gene:AT1G71350 / 843476 AraportID:AT1G71350 Length:597 Species:Arabidopsis thaliana


Alignment Length:622 Identity:169/622 - (27%)
Similarity:275/622 - (44%) Gaps:107/622 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLKPYRPKSSAALKGSDSKKFRQRVEAAFPHVS---VDQLVPAKAAVTQVKILTHGGVQSMVYC 62
            ||.|....||...|.|:|.||.|:.|....|.::   :|.::|.|..:|..|...    :.:||.
plant     1 MFKKAVEAKSHQRLSGADRKKLRRTVRNRLPLLTDELLDAILPPKVEITLSKFQN----RVIVYS 61

  Fly    63 VD-KLPLFFELD--GGQLVPTLYTLWIVPDILPYFTTHEGVLPK-LTNGADLMLPGVV--PLGVG 121
            :: ..|:||::|  |.::.||::.||..|::||.|....|.:.: :..|||||.||::  |.|  
plant    62 IEGGCPMFFDIDGRGTEIFPTVFALWEAPEMLPSFMLKGGEVSRYIIGGADLMFPGILIPPQG-- 124

  Fly   122 LSMYGHFKKGQLMAVNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKLWS-----HE 181
               |..|..|::.||.:..|.:.:.||....||:|....|..|.|:::.|.:.|.||.     :.
plant   125 ---YPSFSAGEIWAVKVPGNLAPIAVGCTTMSSEEARKAGLRGKALRITHYYRDFLWESAEGHYV 186

  Fly   182 PS------LVQQIP----------LVKTKALSG--EDFPALGSETERRKTASPATPAPVTFATVA 228
            |:      :|.:.|          ::.|.|.:|  ||..||  ||.....|.....|.|  ..|.
plant   187 PNAGFMEDVVMEDPSYLAPGSGEDILDTSASTGNEEDESAL--ETASTSAADAKNDAEV--HVVG 247

  Fly   229 QTEEL---------ETET-AALTLESQEAPESDEEAVEEASPELILKNAFLSALKNHGKKLPLPL 283
            ...||         ||.| ..:||..:|.             :.:|....|.||....|:..||:
plant   248 SMNELYLVDDVCATETNTDKQITLSPEEV-------------DTLLDQCLLQALHTTLKEKDLPI 299

  Fly   284 LTSNFYRLYVV--TEATEQIDLKKTRYKKLSNFLAEMVDQGFIVVREES-KGVDKITSVDLEHPE 345
            ..|..:..:|:  ..:...:|:||:.:||||.:|......|.|.|:|:. |....:.||:..||:
plant   300 PGSTLWANHVLPCRPSGLTLDIKKSSHKKLSKWLQSKASGGMISVKEDKHKKEIVLISVNRSHPD 364

  Fly   346 VVNFITDVKASEANGAASETPLFHS----------ELKEMYIVTDVTAAFFTKLNYKRGEGIPAG 400
            ..:|..:.|.:|    .||:|...|          |:.|:|..:...:|.|..:...:|....|.
plant   365 YKSFKPEKKKAE----VSESPGERSTAQAQSEKGLEIIEVYKSSIHNSAIFASVGEDKGNLYTAS 425

  Fly   401 QIKKIVREYVSKHGLLHPLTK-LVRPDDTLIELY-------GN---REVSLSEMCSLITSKMEHS 454
            :...:|.:|:.|..|:.|..| :|..|..|.:..       |:   .|:...::.|....:|:.:
plant   426 EATDVVFKYIEKENLVKPTNKSMVVLDPILCDALFKGAIKKGSAYPSEIHKKDVGSTFVGRMQPN 490

  Fly   455 YQMCSGKDTSGKPL--------IQMSLATRSGNKKVTLVSNIEAYGIILAEFIKLCKQGAAASTS 511
            :.:..|   .|:|:        :|:....|.||||||.|:.:|.:.|....|....::..|.|||
plant   491 HVVMRG---GGEPVVRKGAVKPVQIMTERRQGNKKVTKVTGMETFLIDPDSFGSELQKKFACSTS 552

  Fly   512 VVKLPHQKHEQLQIQGNQVRFVHTLLTETYKVPPKCI 548
            |.:||.:|..::.|||..:..:...:.|.|.||.:.|
plant   553 VGELPGKKGYEVLIQGGVIDNLARYMVEHYGVPKRYI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2DNP_477481.1 eIF2D_N 6..79 CDD:211423 22/78 (28%)
Tma20 9..178 CDD:224927 56/177 (32%)
PUA 61..175 CDD:294405 39/119 (33%)
eIF2D_C 469..551 CDD:211321 28/80 (35%)
AT1G71350NP_177291.2 eIF2D_N 9..81 CDD:211423 22/75 (29%)
Tma20 19..179 CDD:224927 52/168 (31%)
PUA 65..175 CDD:294405 38/114 (33%)
eIF2D_C 509..592 CDD:211321 28/81 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I2545
eggNOG 1 0.900 - - E1_COG2016
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38244
Inparanoid 1 1.050 166 1.000 Inparanoid score I1581
OMA 1 1.010 - - QHG55541
OrthoDB 1 1.010 - - D401807at2759
OrthoFinder 1 1.000 - - FOG0005549
OrthoInspector 1 1.000 - - oto3767
orthoMCL 1 0.900 - - OOG6_102936
Panther 1 1.100 - - LDO PTHR12217
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4504
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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