DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2D and Mcts1

DIOPT Version :10

Sequence 1:NP_477481.1 Gene:eIF2D / 64874 FlyBaseID:FBgn0041588 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001343288.1 Gene:Mcts1 / 68995 MGIID:1916245 Length:182 Species:Mus musculus


Alignment Length:173 Identity:45/173 - (26%)
Similarity:76/173 - (43%) Gaps:22/173 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LKGSDSKKFRQRVEAAFPHVS--VDQLVPAKAAV------TQVKILTHGGVQSMVYCVDKLPLFF 70
            ||.|..|..:.::...||.:.  ::|::|.|..|      ..::|||..|..          |||
Mouse    18 LKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILTVNGEL----------LFF 72

  Fly    71 ELDGGQLVPTLYTLWIVPDILPYFTTHEGVLPKLTNGADLMLPGVVPLGVGLSMYGHFKKGQLMA 135
            ....|...|||..|...|.|||:....:|.:..:.:||::|.||:...|..|....   ...::|
Mouse    73 RQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAA---VDTIVA 134

  Fly   136 VNLTNNKSAVGVGQLARSSDELYMCGGHGVAIKMLHLFGDKLW 178
            :.....:.|:.||.:..|::::... ..|:.|:.:|...|.||
Mouse   135 IMAEGKQHALCVGVMKMSAEDIEKV-NKGIGIENIHYLNDGLW 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2DNP_477481.1 Pre-PUA 2..88 CDD:436077 22/81 (27%)
PUA_eIF2d-like 90..174 CDD:409298 19/83 (23%)
eIF2D_C 469..551 CDD:211321
Mcts1NP_001343288.1 MCT1_N 5..81 CDD:211422 18/72 (25%)
PUA_MCTS-1-like 81..176 CDD:409297 25/98 (26%)
Blue background indicates that the domain is not in the aligned region.

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