DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2D and eif2d

DIOPT Version :10

Sequence 1:NP_477481.1 Gene:eIF2D / 64874 FlyBaseID:FBgn0041588 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_989398.1 Gene:eif2d / 395035 XenbaseID:XB-GENE-947279 Length:588 Species:Xenopus tropicalis


Alignment Length:114 Identity:24/114 - (21%)
Similarity:39/114 - (34%) Gaps:36/114 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VQLPSRLYIGHSFNNYETTIAGWGQTGQ-STGEVVPVRRLLYFRARVITNTSCLVS---FPLYLS 198
            |::|||.....|..:.|.::..:|..|. :.|.|                  ||.|   |..:|.
 Frog    52 VEMPSRTLRQASHESIEDSMNSYGSEGNLNYGGV------------------CLASDAQFSDFLG 98

  Fly   199 S--------RNVCTSTENGAACVGDEGGPVTVTENGQTILIAVHSYGFS 239
            |        |....:|..|...:|.:      ..|||..:..:.:.|.:
 Frog    99 SMGPAQFVGRQTLATTPMGDVEIGLQ------ERNGQLEVDIIQARGLT 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2DNP_477481.1 Pre-PUA 2..88 CDD:436077
PUA_eIF2d-like 90..174 CDD:409298 10/36 (28%)
eIF2D_C 469..551 CDD:211321
eif2dNP_989398.1 Pre-PUA 2..90 CDD:436077 12/55 (22%)
PUA_eIF2d-like 92..173 CDD:409298 11/56 (20%)
eIF2D_C 495..579 CDD:211321
Blue background indicates that the domain is not in the aligned region.

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