DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESK4 and ALDH1A2

DIOPT Version :9

Sequence 1:NP_001262650.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_003879.2 Gene:ALDH1A2 / 8854 HGNCID:15472 Length:518 Species:Homo sapiens


Alignment Length:173 Identity:35/173 - (20%)
Similarity:40/173 - (23%) Gaps:104/173 - (60%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RLADKFAAQTKFLDLSHNDFRNLR----------FL-SFFEDLDTLILDRNVNLDINTFPYLPSL 155
            ||.||.|      ||...|...|.          || :|:.||..:         |.||.|    
Human   104 RLLDKLA------DLVERDRAVLATMESLNGGKPFLQAFYVDLQGV---------IKTFRY---- 149

  Fly   156 RILWINNCDIANITDWIH-----------RIERH-----------------------CPALDQLS 186
                     .|...|.||           ...||                       .|||    
Human   150 ---------YAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPAL---- 201

  Fly   187 CMGN---------------------------PGIRTVFGGQGP 202
            |.||                           ||:..:..|.||
Human   202 CCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGP 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_001262650.1 leucine-rich repeat 111..132 CDD:275378 7/31 (23%)
leucine-rich repeat 133..154 CDD:275378 5/20 (25%)
leucine-rich repeat 155..181 CDD:275378 6/59 (10%)
ALDH1A2NP_003879.2 ALDH_F1AB_F2_RALDH1 32..512 CDD:143459 35/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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