DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MESK4 and lrrc51

DIOPT Version :10

Sequence 1:NP_525017.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001070236.1 Gene:lrrc51 / 767801 ZFINID:ZDB-GENE-060929-962 Length:181 Species:Danio rerio


Alignment Length:168 Identity:38/168 - (22%)
Similarity:74/168 - (44%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SEDVSFSESILEDNGRISLAYENLKTIPRRLA--DKFAAQTKFLDLS----HNDFRNLRFLSFFE 131
            |.|.||.|        |:...:.|..:|...|  .|..::.||:.:|    :|..::|..|    
Zfish     5 SVDFSFKE--------INTISDVLSDVPNSSAHPPKRDSKKKFISMSFRLNNNSIKDLTGL---- 57

  Fly   132 DLDTLI-----------LDRNVN----LDINTFPYLPSLRILWINNCDIANITDWIHRIERHC-- 179
             :|||.           ||.:.|    :| :....|..||:|:::..:|..:::    :::..  
Zfish    58 -MDTLSALFSEPTRLAWLDLSFNEIKHID-SVLTQLKELRLLYLHGNNIQELSE----VDKLAVL 116

  Fly   180 PALDQLSCMGNPGIRTVFGGQGPREYILQVLPQLKYLD 217
            |:|..::..|||    :...:..|.:::.:||.:|.:|
Zfish   117 PSLHTITLHGNP----IVSERDYRAHLIAMLPHVKMID 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_525017.1 LRR 1..>190 CDD:443914 30/139 (22%)
leucine-rich repeat 111..132 CDD:275378 6/24 (25%)
LRR_9 <114..217 CDD:405295 25/123 (20%)
leucine-rich repeat 133..154 CDD:275378 8/35 (23%)
leucine-rich repeat 155..181 CDD:275378 4/27 (15%)
lrrc51NP_001070236.1 LRR_9 <46..160 CDD:405295 25/119 (21%)
leucine-rich repeat 71..93 CDD:275378 5/22 (23%)
leucine-rich repeat 94..118 CDD:275378 4/27 (15%)

Return to query results.
Submit another query.