Protein Alignment MESK4 and Lrmda

DIOPT Version :9

• Sequence 1: NP_001262650.1
• Gene: MESK4 / 64872
• FlyBaseID: FBgn0043069
• Length: 280
• Species: Drosophila melanogaster
• Sequence 2: XP_006519739.1
• Gene: Lrmda / 76633
• MGIID: 1923883
• Length: 239
• Species: Mus musculus
• Alignment Length: 196
• Identity: 52/196 - (26%)
• Similarity: 77/196 - (39%)
• Gaps: 44/196 - (22%)

  Fly    88 RISLAYENLKTIPRRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFPYL 152
            ::|...::.:.||..|...|....|.||||.|..|:|..||.|..|:.||||.|:..|....|.|
Mouse    10 QVSYVGQSCREIPEHLGRDFGHFAKRLDLSFNLLRSLEGLSAFRSLEELILDNNLLGDDLVLPGL 74

  Fly   153 PSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQGPRE------------- 204
            |.|..|.:|...|.::...:..:....|:|:.||.:||...        |.|
Mouse    75 PHLHTLTLNKNQITDLEYLLDHLAEVTPSLEYLSLLGNVAC--------PNELVNLEKDEEDYKR 131

  Fly   205 ---YILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAFTFKDIIRPKYSRK 266
               ::|..||:||:||....:|                    .|:........|..:::||..|.
Mouse   132 YRCFVLHKLPKLKFLDAQKVTR--------------------QEREEALVRGAFMKVVKPKDFRD 176

  Fly   267 S 267
            |
Mouse   177 S 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MESK4	NP_001262650.1	leucine-rich repeat	111..132	CDD:275378	11/20 (55%)
		leucine-rich repeat	133..154	CDD:275378	9/20 (45%)
		leucine-rich repeat	155..181	CDD:275378	4/25 (16%)
Lrmda	XP_006519739.1	LRR_9	21..159	CDD:373143	46/165 (28%)
		leucine-rich repeat	34..54	CDD:275378	11/19 (58%)
		leucine-rich repeat	55..76	CDD:275378	9/20 (45%)
		leucine-rich repeat	77..103	CDD:275378	4/25 (16%)
		leucine-rich repeat	104..142	CDD:275378	9/45 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	3	2.870