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Protein Alignment MESK4 and Snrpa1

DIOPT Version :10

Sequence 1:	NP_525017.1	Gene:	MESK4 / 64872	FlyBaseID:	FBgn0043069	Length:	280	Species:	Drosophila melanogaster
Sequence 2:	NP_067311.4	Gene:	Snrpa1 / 68981	MGIID:	1916231	Length:	255	Species:	Mus musculus

Alignment Length:	196	Identity:	45/196 - (22%)
Similarity:	75/196 - (38%)	Gaps:	54/196 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   105 DKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRN------VNLDINTFPYLPSLRILWINNC 163
            |:|.|    :|.|.|:.|.|........|.||:::.|      ..||    ..||.|..|.:.|.
Mouse    42 DQFDA----IDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLD----QALPCLTELILTNN 98

  Fly   164 DIANITDWIHRIE--RHCPALDQLSCMGNPGIRTVFGGQGPREYILQVLPQLKYLD--------- 217
            .:..:.|    ::  ....:|..||.:.||    |...:..|.|::..:||::.||
Mouse    99 SLVELGD----LDPLASLKSLTYLSILRNP----VTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155

  Fly   218 -----------GLPTSRNAAY--------ATLSSSQGQGPDSTSNSE--KPPLASAFTFKDIIRP 261
                       |...:::.|.        |.|.:.:.:|..|..:.|  |..:|:|.|..::.|.
Mouse   156 QEAEKMFKGKRGAQLAKDIARRSKTFNPGAGLPTDKKKGGPSAGDVEAIKNAIANASTLAEVERL 220

  Fly   262 K 262
            |
Mouse   221 K 221

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.