Protein Alignment MESK4 and lrmda

DIOPT Version :9

• Sequence 1: NP_001262650.1
• Gene: MESK4 / 64872
• FlyBaseID: FBgn0043069
• Length: 280
• Species: Drosophila melanogaster
• Sequence 2: NP_001018537.1
• Gene: lrmda / 553730
• ZFINID: ZDB-GENE-050522-285
• Length: 234
• Species: Danio rerio
• Alignment Length: 217
• Identity: 58/217 - (26%)
• Similarity: 96/217 - (44%)
• Gaps: 30/217 - (13%)

  Fly    76 VSFSESILEDNG-RISLAYENLKTIPRRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILD 139
            ::.:||::..|| ::|....:.:.||..|..|:....:.||||.|..|:|..|..|..|:.||:|
Zfish     1 MAHNESMVVVNGSQVSCIGHDWEDIPDFLGTKYGQMARRLDLSFNQLRSLTGLKAFSQLEELIVD 65

  Fly   140 RNVNLDINTFPYLPSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGG----- 199
            .|:..:....|.||.|..|.:|...:.:|...:..:....|||:.||.:||.........
Zfish    66 NNLLGNDLRLPRLPRLHTLTLNKNQLTDIEALLEHLVEVTPALEYLSLLGNEACPNQLVSMDKDE 130

  Fly   200 ---QGPREYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQG-----------PDSTSNSEKPPLA 250
               |..|.::|..|..||:||    :|.......|.:|.:|           .|:.|::....:|
Zfish   131 DDYQRYRYFVLHKLTNLKFLD----TRRVTQWERSEAQARGAFMKVVKPKNDQDTASDTRSESIA 191

  Fly   251 SAFTFKDIIRPKYSR--KSHSG 270
            :.:|    ..|:.||  ::|.|
Zfish   192 TPYT----PLPRGSRDARNHKG 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MESK4	NP_001262650.1	leucine-rich repeat	111..132	CDD:275378	9/20 (45%)
		leucine-rich repeat	133..154	CDD:275378	7/20 (35%)
		leucine-rich repeat	155..181	CDD:275378	4/25 (16%)
lrmda	NP_001018537.1	leucine-rich repeat	38..58	CDD:275378	9/19 (47%)
		LRR_9	<40..164	CDD:317038	38/127 (30%)
		leucine-rich repeat	59..80	CDD:275378	7/20 (35%)
		leucine-rich repeat	81..107	CDD:275378	4/25 (16%)
		leucine-rich repeat	108..146	CDD:275378	9/37 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	2	1.870