DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESK4 and CG6661

DIOPT Version :9

Sequence 1:NP_001262650.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_648686.3 Gene:CG6661 / 39556 FlyBaseID:FBgn0036403 Length:581 Species:Drosophila melanogaster


Alignment Length:285 Identity:55/285 - (19%)
Similarity:97/285 - (34%) Gaps:94/285 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NSEDSPLNPCL---TEVLRNCANIQSLESLNYEYNDVLLTEDNVGKMITPN---PYSFSGNI--- 66
            :|:.:..||.:   ..||.|.| ||.::....|. ..::.:|.|..|.|..   |:....|:   
  Fly    53 DSQPAEENPSIHRNQRVLVNHA-IQEIQHRPLEV-PTIIGDDTVYTMDTQRVCCPHHLQTNLAHV 115

  Fly    67 ----------SISSCPSEDVSFS--------------ESILEDNG---RISLAYENLKTIP---- 100
                      :|.|..|...::|              .:|:|::.   |:.|.....||..    
  Fly   116 YYANRKQIEAAIKSALSAQGTWSLVPIAQRLAIWRRAATIIEEDELRLRVFLMMTLSKTADDATR 180

  Fly   101 --RRLADKFAAQTKFLD-LSHNDFR-----------NLR----FLSFFEDLDTLILDRNVNLDIN 147
              |||.....|...:|: ||...|.           :||    |::.....:::.|..::.|   
  Fly   181 DIRRLLTSLRANADYLEHLSELRFEIQGDMNVFPSFHLRPMDGFVAALAPFESVALSSSLAL--- 242

  Fly   148 TFPYLPSLRILWINNCDIANITDWIHR----------IERHCPALDQLSCMGNPGIRTVFGGQGP 202
             .|.|....:||..:.::|.::..|.|          :....||.::|                 
  Fly   243 -CPALMGNTVLWNPSLEVAPVSYLIFRAFQEAGLPSGVINFVPANERL----------------- 289

  Fly   203 REYILQVLPQLKYLDGLPTSRNAAY 227
               .|..:....:..||.|..:||:
  Fly   290 ---FLDTITDAVHFAGLNTQASAAF 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_001262650.1 leucine-rich repeat 111..132 CDD:275378 7/36 (19%)
leucine-rich repeat 133..154 CDD:275378 4/20 (20%)
leucine-rich repeat 155..181 CDD:275378 5/35 (14%)
CG6661NP_648686.3 ALDH-SF 68..567 CDD:299846 52/270 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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