| Sequence 1: | NP_525017.1 | Gene: | MESK4 / 64872 | FlyBaseID: | FBgn0043069 | Length: | 280 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_610315.1 | Gene: | U2A / 35713 | FlyBaseID: | FBgn0033210 | Length: | 265 | Species: | Drosophila melanogaster |
| Alignment Length: | 198 | Identity: | 47/198 - (23%) |
|---|---|---|---|
| Similarity: | 64/198 - (32%) | Gaps: | 80/198 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 114 LDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFPYLPSLRILWINNCDIANITDWIHRIERH 178
Fly 179 CPALDQLSCMGN-----------PG----------IRTVFGGQGPREYILQVLPQLKYLDG---L 219
Fly 220 PTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAFTFKDIIRPKYSRKS----------HSGRMFG 274
Fly 275 NGS 277 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| MESK4 | NP_525017.1 | LRR | 1..>190 | CDD:443914 | 19/75 (25%) |
| leucine-rich repeat | 111..132 | CDD:275378 | 7/17 (41%) | ||
| LRR_9 | <114..217 | CDD:405295 | 30/123 (24%) | ||
| leucine-rich repeat | 133..154 | CDD:275378 | 2/20 (10%) | ||
| leucine-rich repeat | 155..181 | CDD:275378 | 7/25 (28%) | ||
| U2A | NP_610315.1 | LRR_9 | 1..175 | CDD:405295 | 39/173 (23%) |
| leucine-rich repeat | 22..43 | CDD:275380 | |||
| leucine-rich repeat | 46..65 | CDD:275378 | 9/39 (23%) | ||
| leucine-rich repeat | 66..89 | CDD:275378 | 7/25 (28%) | ||
| leucine-rich repeat | 90..114 | CDD:275378 | 4/23 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||