DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESK4 and CG11634

DIOPT Version :9

Sequence 1:NP_001262650.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001286129.1 Gene:CG11634 / 35434 FlyBaseID:FBgn0032968 Length:298 Species:Drosophila melanogaster


Alignment Length:198 Identity:38/198 - (19%)
Similarity:70/198 - (35%) Gaps:55/198 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 YENLKTIPRRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLD--------------TLILDRNVN 143
            ::..|..||.:..:..:|::     ||:..:|..:..::.:.              |...||::.
  Fly     2 FDTTKYFPRSVDSEHPSQSE-----HNESLSLDHVVTYDMVHNPEGRSPDHSVIEMTSEADRHIG 61

  Fly   144 LDINTFPYLPSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNP----GIRTVFGGQGPR- 203
            .|:.:   .|.|.|::    :..:|...:|.|         :..:.||    .:..|...:..| 
  Fly    62 HDVTS---SPQLMIIF----EEGDINSALHFI---------IESVHNPFASNAVAMVLVEEKIRG 110

  Fly   204 EYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSN--------SE-KPPLASAFTFKDII 259
            |.:.::|.:|..|........:..|.|....      |||        || .||:||.....|..
  Fly   111 EIVERILSKLHPLSKFVAEHPSYLAALEKCH------TSNFNIIRACISEVAPPMASPIFVCDCT 169

  Fly   260 RPK 262
            ..|
  Fly   170 HDK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_001262650.1 leucine-rich repeat 111..132 CDD:275378 3/20 (15%)
leucine-rich repeat 133..154 CDD:275378 4/34 (12%)
leucine-rich repeat 155..181 CDD:275378 5/25 (20%)
CG11634NP_001286129.1 DUF1487 64..279 CDD:254173 27/131 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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