DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MESK4 and aldh3b1

DIOPT Version :9

Sequence 1:NP_001262650.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_775328.2 Gene:aldh3b1 / 282559 ZFINID:ZDB-GENE-021120-3 Length:473 Species:Danio rerio


Alignment Length:193 Identity:35/193 - (18%)
Similarity:58/193 - (30%) Gaps:80/193 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SILEDNGRISLAYENLKTIPRRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLD 145
            |:.|||                       :|:.|:..|.|....:|.:...::|.::.|...|  
Zfish    35 SLFEDN-----------------------ETQILEALHEDLAKPKFETVLSEIDIVVNDICYN-- 74

  Fly   146 INTFPYLPSLRILWINNCDIANITDWIHRIERHCPA---------LDQLSCMGNP-GIRTVFGGQ 200
                               |:|:..|:.      |:         ||.......| |:..:.|..
Zfish    75 -------------------ISNLQTWMQ------PSYVGTNLATKLDDCFVRREPLGVVLIIGAW 114

  Fly   201 GPREYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAFTFKDIIRPKY 263
               .|.:|::  |..|.|...:.|.|...        |...|.:.:..||.       :.|||
Zfish   115 ---NYPIQLI--LSPLIGAIAAGNCAILK--------PSEISKATEKLLAE-------LIPKY 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_001262650.1 leucine-rich repeat 111..132 CDD:275378 5/20 (25%)
leucine-rich repeat 133..154 CDD:275378 3/20 (15%)
leucine-rich repeat 155..181 CDD:275378 3/25 (12%)
aldh3b1NP_775328.2 ALDH_F3AB 5..449 CDD:143450 35/193 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.