DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESK4 and ALDH1A1

DIOPT Version :9

Sequence 1:NP_001262650.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_000680.2 Gene:ALDH1A1 / 216 HGNCID:402 Length:501 Species:Homo sapiens


Alignment Length:240 Identity:42/240 - (17%)
Similarity:67/240 - (27%) Gaps:96/240 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LESLNYEYNDVLLT---EDNVGKMITP--NPYSFSGNISISSCPSEDVSFSESILEDNGRISLAY 93
            |..|..:|..:.:.   .|:|.....|  ||.:......:.....|||..:........:|...:
Human    13 LTDLKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPW 77

  Fly    94 ENLKTIPR-----RLAD------------------KFAAQTKFLDLSHNDFRNLRFLSFFEDLDT 135
            ..:....|     :|||                  |..:.....||: ...:.||:.:.:.|   
Human    78 RTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLA-GCIKTLRYCAGWAD--- 138

  Fly   136 LILDRNVNLDINTFPY----------------LPSLRILWINNCDIANITDWIHRIERHCPALDQ 184
            .|..|.:.:|.|.|.|                .|.:.::|                 :..||   
Human   139 KIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIW-----------------KIGPA--- 183

  Fly   185 LSCMGN---------------------------PGIRTVFGGQGP 202
            ||| ||                           ||:..:..|.||
Human   184 LSC-GNTVVVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGP 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_001262650.1 leucine-rich repeat 111..132 CDD:275378 4/20 (20%)
leucine-rich repeat 133..154 CDD:275378 6/36 (17%)
leucine-rich repeat 155..181 CDD:275378 1/25 (4%)
ALDH1A1NP_000680.2 ALDH_F1AB_F2_RALDH1 15..495 CDD:143459 41/238 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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