DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESK4 and LOC100331330

DIOPT Version :10

Sequence 1:NP_525017.1 Gene:MESK4 / 64872 FlyBaseID:FBgn0043069 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_068078894.1 Gene:LOC100331330 / 100331330 -ID:- Length:202 Species:Danio rerio


Alignment Length:175 Identity:53/175 - (30%)
Similarity:77/175 - (44%) Gaps:23/175 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PYSFSGNISISSCPSEDVSFSESILEDNG--------RISLAYENLKTIPRRLADKFAAQTKFLD 115
            |:|:      ::..:||:..........|        |:|.||::|..||.....|.....:.||
Zfish     2 PWSW------AAAAAEDIDMESGPSTPAGPAVELGLRRLSFAYQDLLEIPYDTILKQQDSLEVLD 60

  Fly   116 LSHNDF-RNLRFLSFFEDLDTLILDRNVNLDINT-FPYLPSLRILWINNCDIANITDWIHRIERH 178
            ||:|.. .|...|...|.|.|||||.| |...:. ||::|||..||||...|:|:...:..|...
Zfish    61 LSYNLLEENPALLGGLEKLSTLILDCN-NYSAHVKFPFMPSLTTLWINKNKISNLPIIVEEICCK 124

  Fly   179 CPALDQLSCMGNPGIRTVFGGQG------PREYILQVLPQLKYLD 217
            .|.:..||.|.|....:.|.|..      .|:|::..:..|:.||
Zfish   125 FPNIKILSMMNNEAAPSYFNGGSLTQYIDYRQYVISQILGLEVLD 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESK4NP_525017.1 LRR 1..>190 CDD:443914 45/140 (32%)
leucine-rich repeat 111..132 CDD:275378 7/21 (33%)
LRR_9 <114..217 CDD:405295 38/110 (35%)
leucine-rich repeat 133..154 CDD:275378 10/21 (48%)
leucine-rich repeat 155..181 CDD:275378 8/25 (32%)
LOC100331330XP_068078894.1 LRR <31..>137 CDD:443914 40/106 (38%)
leucine-rich repeat 31..55 CDD:275380 8/23 (35%)
leucine-rich repeat 56..78 CDD:275380 7/21 (33%)
leucine-rich repeat 79..100 CDD:275380 10/21 (48%)
LRR_9 <95..189 CDD:405295 24/75 (32%)
leucine-rich repeat 101..127 CDD:275380 8/25 (32%)

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