DRSC/TRiP Functional Genomics Resources

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Protein Alignment ISL2 and ap

DIOPT Version :10

Sequence 1:NP_665804.1 Gene:ISL2 / 64843 HGNCID:18524 Length:359 Species:Homo sapiens
Sequence 2:NP_724428.1 Gene:ap / 35509 FlyBaseID:FBgn0267978 Length:469 Species:Drosophila melanogaster


Alignment Length:316 Identity:100/316 - (31%)
Similarity:150/316 - (47%) Gaps:65/316 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFGI-KCA 90
            |.|||.||.|:|.|. :.:..|||:||:|..|.|.|:...:|:.|||..|||.||...||. :|:
  Fly   148 CSGCGRQIQDRFYLS-AVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGTRRCS 211

Human    91 KCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLLE------- 148
            :|....||::||||||:.|:|:.||.|:||...|..||::.:.:..:.||..:.:..|       
  Fly   212 RCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHYSIAREGDTASSS 276

Human   149 -------RAAAGSPRSPGPLPGA-------------------RGLHLPDAGSGRQPALRP----- 182
                   .|..|||.:....|.:                   .||..|....||....:|     
  Fly   277 MSATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPARQKGRPRKRKPKDIEA 341

Human   183 ---HVHKQTE--------------KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGL 230
               ::...||              :|.|:||.....||.|:::.:|.|..|||...:||.:.|||
  Fly   342 FTANIDLNTEYVDFGRGSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGL 406

Human   231 SPRVIRVWFQNKRCKDKKKSILMKQ-----LQQQQHS-DKTSLQGLTGTPLVAGSP 280
            ..||::|||||.|.|.::  ::|||     |::.:.: |..|:...:.|..:.|.|
  Fly   407 PKRVLQVWFQNARAKWRR--MMMKQDGSGLLEKGEGALDLDSISVHSPTSFILGGP 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ISL2NP_665804.1 LIM1_Isl 27..81 CDD:188752 25/53 (47%)
LIM2_Isl2 89..143 CDD:188855 22/53 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..191 12/80 (15%)
HOX 191..247 CDD:197696 26/55 (47%)
LIM-binding domain (LID). /evidence=ECO:0000250 272..301 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..359
apNP_724428.1 LIM1_Lhx2_Lhx9 148..201 CDD:188755 25/53 (47%)
LIM2_Lhx2_Lhx9 206..264 CDD:188763 23/57 (40%)
Homeodomain 368..424 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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