DRSC/TRiP Functional Genomics Resources

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Protein Alignment BMI1 and mig-32

DIOPT Version :10

Sequence 1:NP_005171.4 Gene:BMI1 / 648 HGNCID:1066 Length:326 Species:Homo sapiens
Sequence 2:NP_001255620.1 Gene:mig-32 / 178150 WormBaseID:WBGene00008684 Length:549 Species:Caenorhabditis elegans


Alignment Length:248 Identity:67/248 - (27%)
Similarity:117/248 - (47%) Gaps:34/248 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     4 TTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRPLL 67
            |.:..:..|||.:.|.:|.||.:||||||:|:|:|||:|::.|.|: :..||.|...:|.:.|..
 Worm   315 TVKYNMEVLNPFITCGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTH 379

Human    68 NIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD-EDKRIITDDEII 131
            .:..|:.:.::|.:.||.:..||:..|:.|......|...:.:.|||..... |.:||...:...
 Worm   380 YVTYDRAVNELVNQFVPKMENNELDVRKTFLRDCREALGIDTAAEDRERKERLERERITGTNRCY 444

Human   132 SLSIEFFDQNRLDRKVNKDKEKSKEEVN-----------DKRYLRCPAAMTVMHLRKFLRSKM-- 183
            .|....|..:|.|.:|.         ||           .:.|:||....|:..|:|||..::  
 Worm   445 PLERPRFSHHRDDCQVT---------VNLLPGTANLPLITRPYVRCSEMTTMNTLKKFLSLQIWD 500

Human   184 DIPNTFQIDVMYEEEPL-KDYYTLMDIAYIYTWRRNG-----PLPLKYRVRPT 230
            |......:|:..:.:.: ||:    .:.:::..:|.|     ||.::|.:..|
 Worm   501 DQSRYSDLDMFCDGQLMGKDF----SVRFVWMMKRRGQPKSEPLIIRYHMTRT 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BMI1NP_005171.4 RING-HC_PCGF4 5..101 CDD:438394 34/96 (35%)
Nuclear localization signal. /evidence=ECO:0000255 81..95 4/13 (31%)
RAWUL_PCGF4 130..226 CDD:340685 23/114 (20%)
Interaction with PHC2. /evidence=ECO:0000269|PubMed:27827373 162..182 8/19 (42%)
Interaction with E4F1. /evidence=ECO:0000269|PubMed:16882984 164..228 16/71 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..326
mig-32NP_001255620.1 RING-HC_PCGF3 316..382 CDD:438393 26/65 (40%)
RAWUL_PCGF_like 459..545 CDD:340519 19/98 (19%)
Blue background indicates that the domain is not in the aligned region.

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