DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIAH1 and sinah

DIOPT Version :10

Sequence 1:NP_001006611.1 Gene:SIAH1 / 6477 HGNCID:10857 Length:313 Species:Homo sapiens
Sequence 2:NP_648927.1 Gene:sinah / 39885 FlyBaseID:FBgn0259794 Length:351 Species:Drosophila melanogaster


Alignment Length:324 Identity:137/324 - (42%)
Similarity:193/324 - (59%) Gaps:26/324 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTGKATPPSLYSWRGVLFTCLPAARTRKRKEMSRQTATALPTGTSKCPPSQRVPAL--------- 56
            :|.:.:.|:|         .:|...|.....:.||:..|...|  :..||:|..::         
  Fly    32 LTRRQSAPAL---------VVPPEETTHVVVVKRQSPDAAAAG--ELVPSRRKDSVAVQSGIVAT 85

Human    57 -----TGTTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNL 116
                 |.:.|.::.|.:|.||||||.|::|||:||..|||:||.||.|||.||.||..:.:||:|
  Fly    86 GPLDTTRSGARDDFLMALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSL 150

Human   117 AMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMH 181
            ||||||:.::||||::..||...|.:.||..|||.||.|||.||.|...|.|||.|..|..|||.
  Fly   151 AMEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMS 215

Human   182 QHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTR 246
            .|:::.|::|.||:||||::||.||:||.|:|||.|.||:|.|||....:..||:|...::||:.
  Fly   216 SHENVITMEGNDIIFLATNVNLEGALDWTMVQSCHGRHFLLSLEKINLGEDCQQYFTACRMIGSM 280

Human   247 KQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTI 310
            |.|..|.|.:.|..:.|.|.|::.||||.|.. ::..|:|.||.:....:||:|:|||.:||.|
  Fly   281 KDAAEFVYNISLEAYNRTLRWQSKPRSIRENF-SSFTNADFLVLNKHTVELFSEDGNLALNVVI 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIAH1NP_001006611.1 RING-HC_SIAH2 67..117 CDD:438410 29/49 (59%)
Sina 113..309 CDD:460824 93/195 (48%)
sinahNP_648927.1 RING_Ubox 102..151 CDD:473075 29/48 (60%)
Sina 147..341 CDD:460824 92/194 (47%)

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