DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIAH1 and sina

DIOPT Version :10

Sequence 1:NP_001006611.1 Gene:SIAH1 / 6477 HGNCID:10857 Length:313 Species:Homo sapiens
Sequence 2:NP_476725.1 Gene:sina / 39884 FlyBaseID:FBgn0003410 Length:314 Species:Drosophila melanogaster


Alignment Length:306 Identity:219/306 - (71%)
Similarity:241/306 - (78%) Gaps:21/306 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    28 KRKEMSRQTATALPTGTSKCPPSQRVPALTGTTASNN---------------------DLASLFE 71
            ||:|.:...|.|..||.:....:....:..|.|:|.|                     ||.||||
  Fly     8 KRREPTAAAAGAGATGVATNTSTSTGSSSAGNTSSANTSSSSSSSLSSAGGGDAGMSADLTSLFE 72

Human    72 CPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGC 136
            |||||||||||||||.||||||.:||.||||||||||||.:||||||||||::|.||||::..||
  Fly    73 CPVCFDYVLPPILQCSSGHLVCVSCRSKLTCCPTCRGPLANIRNLAMEKVASNVKFPCKHSGYGC 137

Human   137 EITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDI 201
            ..:|.:|||.:|||.||.|||.||||||||||||.||.||.|||..|||||||||||||||||||
  Fly   138 TASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTLQGEDIVFLATDI 202

Human   202 NLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLT 266
            ||||||||||||||||.||||||||||||||||||||||||||:||:||||.|||||||:|||||
  Fly   203 NLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQLIGSRKEAENFVYRLELNGNRRRLT 267

Human   267 WEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISM 312
            |||.|||||||:|:||.||||||||||||||||:|||||||||||:
  Fly   268 WEAMPRSIHEGVASAIHNSDCLVFDTSIAQLFADNGNLGINVTISL 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIAH1NP_001006611.1 RING-HC_SIAH2 67..117 CDD:438410 42/49 (86%)
Sina 113..309 CDD:460824 163/195 (84%)
sinaNP_476725.1 RING_Ubox 68..118 CDD:473075 42/49 (86%)
Sina 114..310 CDD:460824 163/195 (84%)

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