DRSC/TRiP Functional Genomics Resources

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Protein Alignment SHOX and ems

DIOPT Version :10

Sequence 1:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens
Sequence 2:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster


Alignment Length:67 Identity:29/67 - (43%)
Similarity:41/67 - (61%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   116 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMH 180
            |.:|.||.|:..||.:||..|:...|.....|:.|:|.|.|||.:|:|||||||.|.::.:.:..
  Fly   387 KPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDE 451

Human   181 KG 182
            ||
  Fly   452 KG 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 1/2 (50%)
Homeodomain 118..174 CDD:459649 26/55 (47%)
SH3-binding. /evidence=ECO:0000255 242..249
OAR 272..288 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287
emsNP_731868.1 Homeodomain 389..445 CDD:459649 26/55 (47%)
Blue background indicates that the domain is not in the aligned region.

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