DRSC/TRiP Functional Genomics Resources

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Protein Alignment SHBG and shbg

DIOPT Version :10

Sequence 1:NP_001031.2 Gene:SHBG / 6462 HGNCID:10839 Length:402 Species:Homo sapiens
Sequence 2:NP_001007152.1 Gene:shbg / 322604 ZFINID:ZDB-GENE-030131-1324 Length:381 Species:Danio rerio


Alignment Length:428 Identity:125/428 - (29%)
Similarity:181/428 - (42%) Gaps:101/428 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    12 LLLLL---LLLLLR----------------HTRQGWALRPVLPTQSAHDPPAVHLSNGPGQEPIA 57
            ::|||   |:||.|                |.:|.|.                     |..:..|
Zfish     8 IILLLCPCLILLCRRAAGDQISGRGTINLAHRQQKWT---------------------PAMQTCA 51

Human    58 VMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGP 122
                :|:.|....|.||.||.||||.:|||||....|||:|.||||.||:|:......::|..|.
Zfish    52 ----NLSDIRSIRSFFEFRTLDPEGAVFYGDTKEGQDWFVLSLRDGIPEMQIGKADILVSVKGGR 112

Human   123 RLDDGRWHQVEVKMEGDSVLLEVDGE-EV---LRLRQVSGPLTSKRHPIMRIALGGLLFPASNLR 183
            :|:||.||.:|::.||..|:|||:.| |:   |..:.....||.|    :|:||||:|.....|.
Zfish   113 KLNDGAWHLLELRSEGKFVVLEVNNEVELVVGLHSKLAEEQLTGK----IRLALGGMLVDKQKLF 173

Human   184 LPLVPALDGCLRRDSWLDKQAEISASAPTSLRSCDVESNPGIFLPPGTQAEFNLRDIPQPHAEPW 248
            .|..|.:|.|:|...||:........:....|.|..|...|.:.|....|.||..|:|....|..
Zfish   174 HPFEPEMDACIRGGHWLNLSTPWDTDSTWEPRPCSSEIKKGSYFPGTGVAVFNTSDLPALKTEEA 238

Human   249 AFSLDLGLKQAAGSGHLLALGTPENPSWL--SLHLQ------------DQKVVLSSGSGPGLDLP 299
            ..::::             .|     ||:  :|.||            |.|:.|..||......|
Zfish   239 GITVEI-------------FG-----SWIGTTLSLQSTGFLYVLEGDKDDKLGLKDGSTEFPSEP 285

Human   300 LVLGLPLQLKLSMSRVVLSQGSKMKALALPPLGLAPLLNLWAKPQGRLFLGALPGED---SSTSF 361
            ..|...: ||.|:   |::...|:|:..|      ..|::| |....|..|.:||:.   .|..:
Zfish   286 ATLTFTI-LKNSL---VVNSKPKVKSETL------DFLSMW-KNGMLLTFGGVPGDSEVAKSNPY 339

Human   362 ---CLNGLWAQGQRLDVDQALNRSHEIWTHSCPQSPGN 396
               ||..:..|||.:|:|:|..:...:.:||||....|
Zfish   340 LRGCLEKIVVQGQVIDLDRAAYKHTAVSSHSCPTEAMN 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SHBGNP_001031.2 Laminin_G_1 75..205 CDD:395008 56/133 (42%)
shbgNP_001007152.1 LamG 65..191 CDD:473984 55/129 (43%)
LamG 214..349 CDD:473984 38/163 (23%)

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