Sequence 1: | NP_072150.1 | Gene: | Nphs1 / 64563 | RGDID: | 620460 | Length: | 1252 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036705.1 | Gene: | side-VI / 4379854 | FlyBaseID: | FBgn0083950 | Length: | 1087 | Species: | Drosophila melanogaster |
Alignment Length: | 921 | Identity: | 184/921 - (19%) |
---|---|---|---|
Similarity: | 311/921 - (33%) | Gaps: | 276/921 - (29%) |
- Green bases have known domain annotations that are detailed below.
Rat 348 LQVTFPPSAITILGSVSQSE-------------------NKNVTLCCLTKSSR--PRVLLRWWLG 391
Rat 392 GRQLLPTDETVMDGLHGG--------HISMSNLTFLVRREDNGLPLTCEAFSDAFS---KETFKK 445
Rat 446 SLTLN-------VKYPAQ-------KLWIE---GPPEGQYIRTGTRVRLVCLAIGGNPDPSLIWF 493
Rat 494 KDSRPVSEPRQPQEPRRVQLGSVEKS-------GSTFSRELVLIIGPPDNRAKFSCKAGQLS--- 548
Rat 549 ASTQLVVQ--FPPTNLTILANSSALRPGDALNLTCVSISSNPPVNLSWDKEGERLEDVAAKPQSA 611
Rat 612 PFKGSAASRSVFLRVSSRDHGQRVTCRAHSEALRETV-SSFYRFNVLYPPEF---LGEQVRAVTV 672
Rat 673 VEQGQVLLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSGGALQLWNVTRADDGFYQLHCQN 737
Rat 738 SEGTAEA-LLKLDVHYAPTIRALRDPTEVNVGG-----SVDIVCTVDANPILPEMFSWERLGEEE 796
Rat 797 EDLNLDDMEKVSKGSTGRLRIRQAKLSQAGAYQCIVDNGVAPAARGLVRLVVRFAPQVDQPTPLT 861
Rat 862 KVAAAGDSTSSATLHCRARGVPNIDFTWTKNGVPLDLQDPRYTEHRYHQGVVHSSLLTIANVSAA 926
Rat 927 QDYALFKCTATNALG--SDHTNIQLVSISRPDPPLGLKVVSISPHSVGLEWKPGFDGGLPQRFQI 989
Rat 990 R-YEALETPGFLHVDVLPTQATTFTLTGLKPSTRYRIWLLASNALGDS------GLTDKGIQ--- 1044
Rat 1045 VSVTT-PGPDQAPEDTDHQLPTELPPGPPRLPLLPVLFAVGGLLLLSNASCVG-GLLWRRRLR-- 1105
Rat 1106 -------------------------RLAEEISEKTEAGSE--------DRIRNEYEESQWTGDRD 1137
Rat 1138 TRSSTVSTAEV 1148 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nphs1 | NP_072150.1 | Ig | 52..128 | CDD:299845 | |
IG_like | 52..127 | CDD:214653 | |||
C2-set_2 | 155..242 | CDD:285423 | |||
Ig_3 | 256..335 | CDD:290638 | |||
IG_like | 268..350 | CDD:214653 | 0/1 (0%) | ||
C2-set_2 | 358..440 | CDD:285423 | 20/113 (18%) | ||
I-set | 460..555 | CDD:254352 | 21/107 (20%) | ||
Ig | 472..555 | CDD:299845 | 17/92 (18%) | ||
Ig | 563..646 | CDD:299845 | 18/82 (22%) | ||
IG_like | 670..750 | CDD:214653 | 22/80 (28%) | ||
Ig | 676..750 | CDD:299845 | 21/74 (28%) | ||
Ig_3 | 753..834 | CDD:290638 | 19/85 (22%) | ||
IG_like | 762..848 | CDD:214653 | 17/90 (19%) | ||
Ig | 848..956 | CDD:299845 | 13/109 (12%) | ||
IG_like | 859..949 | CDD:214653 | 9/91 (10%) | ||
FN3 | 955..1049 | CDD:238020 | 27/103 (26%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1043..1067 | 5/27 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1113..1144 | 7/38 (18%) | |||
side-VI | NP_001036705.1 | IG_like | 35..140 | CDD:214653 | 23/106 (22%) |
Ig_3 | 157..230 | CDD:290638 | 20/95 (21%) | ||
IG_like | 165..242 | CDD:214653 | 18/99 (18%) | ||
Ig | 265..343 | CDD:299845 | 17/80 (21%) | ||
IG_like | 267..343 | CDD:214653 | 17/78 (22%) | ||
IG_like | 363..440 | CDD:214653 | 22/77 (29%) | ||
IGc2 | 364..429 | CDD:197706 | 19/65 (29%) | ||
IG_like | 456..532 | CDD:214653 | 27/180 (15%) | ||
Ig_3 | 456..524 | CDD:290638 | 25/172 (15%) | ||
fn3 | 545..622 | CDD:278470 | 21/79 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3515 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |