back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pnpo and CG31473

DIOPT Version :9

Sequence 1:	NP_072123.1	Gene:	Pnpo / 64533	RGDID:	621456	Length:	261	Species:	Rattus norvegicus
Sequence 2:	NP_731188.1	Gene:	CG31473 / 318753	FlyBaseID:	FBgn0051473	Length:	257	Species:	Drosophila melanogaster

Alignment Length:	231	Identity:	69/231 - (29%)
Similarity:	105/231 - (45%)	Gaps:	35/231 - (15%)

- Green bases have known domain annotations that are detailed below.

  Rat    44 DREAFEEAHLTSLDPMKQFASWFEEA-VQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGF 107
            ::..:||.|:.       |.:|...| .:.|.: .....|:||..:.|:|..|:..::.....|.
  Fly    40 EQRVYEEPHVI-------FQNWLMAAQKEAPQV-RPRLACMATVDKSGEPVTRLTSIEEVNSHGI 96

  Rat   108 RFFTNYESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEKEAENYFHSRPKSSQIG---- 168
            .|||...||:..|:.:||..||.|.|.||.|.||:.|...:|.|::..:.|...|:..|:.
  Fly    97 TFFTTLGSRQAGEISANPHVSLHFNWAPLMRSVRIAGSAHQLTEEQVRDQFRRFPRHVQMSITHG 161

  Rat   169 ---AVVSRQSSVIPDREYLRKKNEELGQLYREQEVPKPEYWGGYILYPQVMEFWQ------GQTN 224
               |....||.........::.|..||:  :.:|:|.|..||||||.|.:.||..      |:|
  Fly   162 PRYAAAEWQSRSGFFARIGQRLNTWLGK--QPEEIPMPHNWGGYILTPSLYEFGMLSGEKAGRT- 223

  Rat   225 RLHDRIVFRRGLATGDSPLGPMTHHGE---EDWVYE 257
                |:.|||.|   :.|.|....|.:   :||||:
  Fly   224 ----RVRFRRCL---EMPRGTRVGHVQAERQDWVYD 252

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.