DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a2 and CG31262

DIOPT Version :9

Sequence 1:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:639 Identity:144/639 - (22%)
Similarity:242/639 - (37%) Gaps:164/639 - (25%)


- Green bases have known domain annotations that are detailed below.


  Rat    18 IDN----PADILVIAAYFLLVIGVGLW------------SMFRTNRGT------VGGYFLAGRSM 60
            :||    ..|.||:.|..||..|.|::            |:...||.|      :..|.:..|:|
  Fly     1 MDNYRFGTVDYLVLVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNM 65

  Rat    61 VWWPVGASLFASNIGSGHFVGLAGTGAASGLAVAGFEWNALFVVLLL-----GWLFVPVYLTAGV 120
            ...||..:|:       ....:.||  .|.:...|.::..:.|.::|     .::::|||....:
  Fly    66 KVIPVSITLY-------RVTSIIGT--PSEIYHYGTQYYLIIVAIILQGIAFSYVYLPVYSALQI 121

  Rat   121 ITMPQYLRKRFGGRRIRLYLSVLSLFLYIF---TKISVDMFSGAVFIQQALGWNIYASVIALLGI 182
            .:..:||     |.|....:...:.|:|:|   |.:...::..|:.:.|..|.|.:     |:|:
  Fly   122 GSAYEYL-----GLRFNSIIRTTASFMYVFGILTYLPFIVYVPALSLSQVSGLNTH-----LIGL 176

  Rat   183 TMI-----YTVTGGLAALMYTDTVQTFVILAGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSK 242
            .:|     ||..|||.|:::||..|..|:......:...|.:...|...:||             
  Fly   177 VIILACVTYTFMGGLKAVVHTDVWQVAVMFLSLVAVAFLAIYYSNGLVAVFD------------- 228

  Rat   243 DPAVGN---ISSTCYQPRPDSYHLLRDPVTGDLPWPALLLGLTIVSGWYWCS----DQVIVQRCL 300
            |...|.   :::|  .|.|...|.:         |..|:.|.:     :|.|    .|.:|||.:
  Fly   229 DAEQGGRLMLANT--NPSPYVRHTV---------WSVLIGGFS-----FWTSVNAGGQHMVQRYM 277

  Rat   301 AGKNLTHIK--------------AGCILCGYLKLMPMFLMVMPGMISRILYPDEVACVVPEVCKR 351
            :..:|...:              |.|...|.| |...:....|.....||..|::          
  Fly   278 SLPSLKKSRQASFIFTIGVSIFIALCCFMGLL-LFSKYKDCDPRSAGMILNDDQL---------- 331

  Rat   352 VCGTEVGCSNIAYPRLVVKLMPN--GLRGLMLAVMLAALMSSLASIFNSSSTLFTMDI---YTRL 411
                        .|..||:.:.:  |:.||.:|.:..|.:|||:|.||:.|.:|..||   :.::
  Fly   332 ------------LPLFVVQSVGHIYGMPGLFIAGIFGAGLSSLSSCFNTVSMVFLEDIVRGFFKM 384

  Rat   412 RPRAGDRELLLVGRLWVVF--IVAVSVAWLPVVQAAQGGQLFDYIQSVSSYLAPPVSAVFVLALF 474
            .|  .:|:..::.:..::|  |:|..:.:|  :|..:|  :.....|:||..|.....||.|.:.
  Fly   385 EP--SERQSTILIKTCIIFQGILAFLIVFL--LQHLRG--ILSVCNSISSITAGTSFGVFTLGML 443

  Rat   475 VPRVNEKG-AFWGLIGGLLMGLARLIPEFFFGTG------------SCVRPSACP--------AI 518
            .|..|..| |..||...||.|......:....:|            .||.....|        .:
  Fly   444 FPWANTIGTAVGGLSSVLLAGWISFGSQIAAASGQLKSGMLPVSVKECVGNVTLPEDPWVDQDQV 508

  Rat   519 F--CRVHYLYFAIILFFCSGFLTLAISLCTAPIPQKHLH-RLVFSLRHSKEERE 569
            |  .|:.|.:.:.|....:..:...:||.|.|...|.|| .|:..:.|....||
  Fly   509 FPLYRLSYHWVSPIGVVTAVVVGALVSLITKPADIKTLHAELISPVIHRFLPRE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:382020 142/631 (23%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 130/589 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340210
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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