DRSC/TRiP Functional Genomics Resources

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Protein Alignment SGSH and sgsh

DIOPT Version :10

Sequence 1:NP_000190.1 Gene:SGSH / 6448 HGNCID:10818 Length:502 Species:Homo sapiens
Sequence 2:NP_001120065.1 Gene:sgsh / 100145064 XenbaseID:XB-GENE-1005174 Length:503 Species:Xenopus tropicalis


Alignment Length:493 Identity:364/493 - (73%)
Similarity:425/493 - (86%) Gaps:4/493 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    10 ALLLVLGLCRARPRNALLLLADDGGFESGAYNNSAIATPHLDALARRSLLFRNAFTSVSSCSPSR 74
            :|||   |.:|..||.||::.||.||||..|||:||.||:|..|::|||:|:|||||||||||||
 Frog    15 SLLL---LSKAWGRNVLLIIGDDAGFESEVYNNTAIHTPNLRDLSKRSLIFKNAFTSVSSCSPSR 76

Human    75 ASLLTGLPQHQNGMYGLHQDVHHFNSFDKVRSLPLLLSQAGVRTGIIGKKHVGPETVYPFDFAYT 139
            |:::||||||||||||||||:|||||||.||||||:|.|||:|||||||||:|||:||||||:||
 Frog    77 AAIMTGLPQHQNGMYGLHQDMHHFNSFDDVRSLPLILRQAGIRTGIIGKKHIGPESVYPFDFSYT 141

Human   140 EENGSVLQVGRNITRIKLLVRKFLQTQDDRPFFLYVAFHDPHRCGHSQPQYGTFCEKFGNGESGM 204
            |||.|||||||||||||||||||||:||.|||.|||||||||||||||||||.||||||||:..|
 Frog   142 EENSSVLQVGRNITRIKLLVRKFLQSQDQRPFLLYVAFHDPHRCGHSQPQYGAFCEKFGNGDPDM 206

Human   205 GRIPDWTPQAYDPLDVLVPYFVPNTPAARADLAAQYTTVGRMDQGVGLVLQELRDAGVLNDTLVI 269
            |.:|||:||.|.|..|.||||:.:||:||.|:||||||:||||||:||||.||.:||..||||||
 Frog   207 GIMPDWSPQYYTPEQVQVPYFIQDTPSARKDIAAQYTTIGRMDQGIGLVLSELYNAGHENDTLVI 271

Human   270 FTSDNGIPFPSGRTNLYWPGTAEPLLVSSPEHPKRWGQVSEAYVSLLDLTPTILDWFSIPYPSYA 334
            |:||||||||:|||||||.|.|||||||||.|.|||||:|:::.||||:|||:|||||||||:|.
 Frog   272 FSSDNGIPFPNGRTNLYWSGRAEPLLVSSPYHQKRWGQISQSFASLLDITPTVLDWFSIPYPNYK 336

Human   335 IFGSKTIHLTGRSLLPALEAEPLWATVFGSQSHHEVTMSYPMRSVQHRHFRLVHNLNFKMPFPID 399
            ||| |::.|||:||||||::|..|.|||||||||||||.|||||||:..:.|:||||||||||||
 Frog   337 IFG-KSVQLTGKSLLPALQSEQDWTTVFGSQSHHEVTMYYPMRSVQNLQYLLIHNLNFKMPFPID 400

Human   400 QDFYVSPTFQDLLNRTTAGQPTGWYKDLRHYYYRARWELYDRSRDPHETQNLATDPRFAQLLEML 464
            ||||||||||||||||.:||||.|:|.|.:||||.||||||||.|..|.:|:|.||.:..:|:.:
 Frog   401 QDFYVSPTFQDLLNRTVSGQPTSWFKTLHNYYYRDRWELYDRSADISEIKNIAEDPAYQDILKSM 465

Human   465 RDQLAKWQWETHDPWVCAPDGVLEEKLSPQCQPLHNEL 502
            ::.|.|||.||.|||:|||||||||||.|||:||:|||
 Frog   466 QNILQKWQSETSDPWMCAPDGVLEEKLEPQCRPLYNEL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SGSHNP_000190.1 SGSH 24..472 CDD:293751 332/447 (74%)
sgshNP_001120065.1 SGSH 26..473 CDD:293751 332/447 (74%)

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