DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a4b and CG33124

DIOPT Version :9

Sequence 1:NP_075708.2 Gene:Slc5a4b / 64454 MGIID:1890478 Length:660 Species:Mus musculus
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:642 Identity:135/642 - (21%)
Similarity:256/642 - (39%) Gaps:163/642 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    28 DISVIVIYFIVVLAVGLW---------SMVRSNRGT------------VGGFFLAGHDMAWWPMG 71
            |.:|.:...|:.:|:||:         .|..|...|            :..:.:....:..:|:.
  Fly    10 DYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVFPVA 74

Mouse    72 ASLFASNIGSNHFVGLAGTGAASGIAIAAVEWNALLMVLVL-----GWVFLPIYIKAGVLTMPEY 131
            .||.||.|.     |:|..|..|.|.....:::.:::.:|:     .:::||::....|.:..||
  Fly    75 MSLIASFIS-----GVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEY 134

Mouse   132 LRKRFGGKRLQIYLSVLSLF--IMVALQTSSIIFSGAIFIQLALGLNLYLAVFILLAITAFYTVA 194
            |..||.    .:..:::|:.  |.|.|.|..::|..|:.:..|.|||:::...:::.:...||:.
  Fly   135 LGMRFH----PLIRNIVSIMFVIEVLLYTPFVVFVPALALNQASGLNIHMIEVLIIVVCVIYTLL 195

Mouse   195 GGLASVIYTDSVQTFIMLLGSLILMGFAFAEVGGYESFTEKYMNAIPSVVEGDNL---TISPKCY 256
            |||.:|::||..|..||....:::...|...:...:.|.|       |:|:|..|   .|:|..|
  Fly   196 GGLKAVVHTDIWQVVIMFASVVVVAILATCYITDLDDFFE-------SLVDGGRLIFGNINPSPY 253

Mouse   257 TPQPDSFHVFRDPVTGDIPWPGLIFGMTILAIWYW----CADQVIVQRCLCGKN--MSHVKAACI 315
            .         |:.|     |..:|.|     .:||    ...|.:|.|.:...|  |:....|..
  Fly   254 V---------RNTV-----WSVVIGG-----AFYWTSITAVHQTMVHRYMSLPNLKMARTSIAFF 299

Mouse   316 LCGYLKLLPMFLMVMP--GMISRILYTDKVACVVPSECEKQCGTAVGCTNYAYPTLVLELMPD-- 376
            :.|.:    :|..|:.  |::...:|.|         |:......:...:...|..|::.:..  
  Fly   300 VLGSI----IFYSVLSFLGLLIFNMYKD---------CDPLSAGQIMNNDQLVPLFVVQSVGHIY 351

Mouse   377 GLRGLMLSVMLASLMSSLTSIFNSASTLFTIDLY------------TKIRKKASERELMIAGR-I 428
            |:.||.::.:..:.:|||:...||.|.:...|:.            :.|..||:   ::|.|. :
  Fly   352 GIPGLFIAGIFGAGLSSLSVFLNSTSLVILQDIVRGCFKMQPGETASAIIVKAT---IVIMGALV 413

Mouse   429 FGMVLIAVSI-----LWVPLVQVSQNGQLFHYIGSVSSYLGPPLGAVFMLAIFFKRVNEQGAFWG 488
            ||.||:...:     :.:.||.:           :.||..|     :|.||:.....|..|...|
  Fly   414 FGEVLLLEKVSGILSICMSLVAI-----------ATSSTFG-----IFTLAVLVPWANTVGTAVG 462

Mouse   489 LMVG-LVVGLIRLIAEFVYGTGSC------VAPSNCPKIICGVHYMY---------FAIILFFVS 537
            .:.| |:.|.|...::....:|..      |:.::||..:.....::         |.:...:::
  Fly   463 GIAGFLLTGWITFGSQIAAASGQLHHHRLPVSVASCPGNVTARENVWVDEEQVFPLFRLSFHWIN 527

Mouse   538 -----IIVILG--VSFLTEPI-----------PDVH--LYRLCWSLWN-NTEERIDL 573
                 .:|::|  ||.:|:|.           |.:|  |.:.|:...| :..|..|:
  Fly   528 PIGALTVVVVGSLVSLVTKPTDIKSLDSDLISPVIHRFLPKECFKQRNLDKSEATDI 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a4bNP_075708.2 SLC5-6-like_sbd 27..660 CDD:294310 135/642 (21%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 122/589 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836553
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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