DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc5a4a and CG31262

DIOPT Version :9

Sequence 1:NP_573447.2 Gene:Slc5a4a / 64452 MGIID:1927848 Length:656 Species:Mus musculus
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:643 Identity:141/643 - (21%)
Similarity:244/643 - (37%) Gaps:158/643 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse    28 DISVIVIYFVVVMAVGVW------------AMLKTNRST------VGGFFLAGRSMTWWPMGASL 74
            |..|:|...::....|::            ::.:.||.|      :..:.:..|:|...|:..:|
  Fly    10 DYLVLVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNMKVIPVSITL 74

Mouse    75 F--ASNIGSGHFVGLAGTGAASGIAVTAFESHSFALLLVLGWIFVPIYIKAGVMTMPEYLKKRFG 137
            :  .|.||:...:...||.....|.....:..:|:      ::::|:|....:.:..|||..||.
  Fly    75 YRVTSIIGTPSEIYHYGTQYYLIIVAIILQGIAFS------YVYLPVYSALQIGSAYEYLGLRFN 133

Mouse   138 GKRLQIYLSILFLFICVILT-ISADIFSGAIFIKLALGLNLYLAILILLAITAIFTITGGLASVI 201
            .   .|..:..|:::..||| :...::..|:.:....|||.:|..|:::.....:|..|||.:|:
  Fly   134 S---IIRTTASFMYVFGILTYLPFIVYVPALSLSQVSGLNTHLIGLVIILACVTYTFMGGLKAVV 195

Mouse   202 YTDTVQAVIMLVGSFILMVFAFVEVGGYESFTEKFMNAIPSVV----EGDNLTINSRCYTPQPDS 262
            :||..|..:|.:.   |:..||:.:        .:.|.:.:|.    :|..|.:.:.  .|.|..
  Fly   196 HTDVWQVAVMFLS---LVAVAFLAI--------YYSNGLVAVFDDAEQGGRLMLANT--NPSPYV 247

Mouse   263 FHIFRDPVTGDIPWPGTAFGMPITALWYW-CIN---QVIVQRCLCGKNLSHVKAACI-------- 315
            .|              |.:.:.|....:| .:|   |.:|||.:...:|...:.|..        
  Fly   248 RH--------------TVWSVLIGGFSFWTSVNAGGQHMVQRYMSLPSLKKSRQASFIFTIGVSI 298

Mouse   316 ---LCGYLKLLPLFFMVM---PGMISRILYTDMVACVVPSECVKHCGVDVGCTNYAYPMLVLKLM 374
               ||.::.|| ||....   |.....||..|.:..:...:.|.|.                   
  Fly   299 FIALCCFMGLL-LFSKYKDCDPRSAGMILNDDQLLPLFVVQSVGHI------------------- 343

Mouse   375 PMGLRGLMLSVMLASLMSSLTSVFNSASTLFTIDLYTKIRK-KASERELLIAGRLFVSVLIVTSI 438
             .|:.||.::.:..:.:|||:|.||:.|.:|..|:.....| :.|||:..|   |..:.:|...|
  Fly   344 -YGMPGLFIAGIFGAGLSSLSSCFNTVSMVFLEDIVRGFFKMEPSERQSTI---LIKTCIIFQGI 404

Mouse   439 LWVPIVEVSQGGQ-LVHYTEAISSYLGPPIAAVFLVAVFCKRANEQG-AFWGLMVGLVMGLIRMI 501
            |...||.:.|..: ::....:|||........||.:.:....||..| |..||...|:.|.|...
  Fly   405 LAFLIVFLLQHLRGILSVCNSISSITAGTSFGVFTLGMLFPWANTIGTAVGGLSSVLLAGWISFG 469

Mouse   502 AEFSYGTG---SCLAPSSCPKIICGV-----------------HYLYFAIILFFVCILVILG--V 544
            ::.:..:|   |.:.|.|..:.:..|                 ...|..:....|...|::|  |
  Fly   470 SQIAAASGQLKSGMLPVSVKECVGNVTLPEDPWVDQDQVFPLYRLSYHWVSPIGVVTAVVVGALV 534

Mouse   545 SYLTKPI-----------PDVH--LHRLCWALRNSKEERIDLDAEDKEENGADDRTEE 589
            |.:|||.           |.:|  |.|.|:..||..|                 ||||
  Fly   535 SLITKPADIKTLHAELISPVIHRFLPRECFRGRNLNE-----------------RTEE 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a4aNP_573447.2 SLC5-6-like_sbd 27..656 CDD:294310 141/643 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..593 4/16 (25%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 121/571 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836558
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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