DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTR6 and Arp1

DIOPT Version :10

Sequence 1:NP_071941.1 Gene:ACTR6 / 64431 HGNCID:24025 Length:396 Species:Homo sapiens
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:405 Identity:106/405 - (26%)
Similarity:186/405 - (45%) Gaps:57/405 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     4 LVLDNGAYNAKIGYSHENVSVIPNCQF-----RSKTARLKT-------FTANQIDEIKDPSGLFY 56
            :|:|||:...|.|::.|:   ||.|:|     |.|..|:..       |...:.:|.:   ||..
  Fly    12 VVIDNGSGVIKAGFAGEH---IPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHR---GLLS 70

Human    57 I-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQ 120
            | .|.:.|.:.:|:...::|.|::.||.......|..:::||...|....:|...|..||.....
  Fly    71 IRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAP 135

Human   121 AVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLK 185
            |:.......||.:...|     :..:::|||...||.||.........:|:|:::.|:.:|.:||
  Fly   136 ALFVSMQAVLSLYATGR-----VTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLK 195

Human   186 EIISYRQLHVMD--ETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGF 248
            .:|.....:...  |..::..:||.|||::.:..::..:       .|....|.|||        
  Fly   196 TLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETV-------ETEKFAYKLPD-------- 245

Human   249 CKPREEMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHF 313
                      ||      |..:...||..||:||.|..:|.:..||.:.::|||:....:::...
  Fly   246 ----------GK------IFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKML 294

Human   314 FKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYAWEGGKLISENDDFEDMVVT 378
            ::||||:||::||.||.||:.||::..:..|..:.:..|:..:...|.||.:::..|.|:.|.::
  Fly   295 YQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWIS 359

Human   379 REDYEENGHSVCEEK 393
            :.:|||.|......|
  Fly   360 KREYEEEGQKAVHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR6NP_071941.1 ASKHA_NBD_Arp6 3..386 CDD:466816 104/396 (26%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 106/405 (26%)

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