DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDH24 and LOC101886358

DIOPT Version :10

Sequence 1:NP_071923.2 Gene:CDH24 / 64403 HGNCID:14265 Length:819 Species:Homo sapiens
Sequence 2:XP_021336085.2 Gene:LOC101886358 / 101886358 -ID:- Length:816 Species:Danio rerio


Alignment Length:792 Identity:392/792 - (49%)
Similarity:509/792 - (64%) Gaps:70/792 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    41 RTRRSWVWNQFFVIEEYAGPEPVLIGKLHSDVDRGEGRTKYLLTGEGAGTVFVIDEATGNIHVTK 105
            |.:|.|:||||||:||:.|.:...:|||||:.|:|:|..:|:|:|||||::|:|:|.||:||.||
Zfish    56 RPKRGWIWNQFFVLEEHIGTDAQYVGKLHSNSDKGDGSVRYILSGEGAGSIFIINEVTGDIHATK 120

Human   106 SLDREEKAQYVLLAQAVDRASNRPLEPPSEFIIKVQDINDNPPIFPLGPYHATVPEMSNVGTSVI 170
            |||||:|:.|||.|||:|..:|:||||.|||||||||||||.|.||.||:..:|||||.:||||.
Zfish   121 SLDREKKSHYVLHAQAIDINTNKPLEPESEFIIKVQDINDNAPKFPDGPFVTSVPEMSELGTSVF 185

Human   171 QVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDRETQEEFLVVIQAKDMGGH 235
            ||||.|||||:|||||::||:||.|.|:|||||:||::|||:.:||||.:|.:.||||||||.|.
Zfish   186 QVTATDADDPTYGNSARVVYSVLHGQPYFSVDPKTGIIRTALADMDREAREHYSVVIQAKDMAGQ 250

Human   236 MGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAGPGTLVGRLRAQDPDLGDNALMAYSILD 300
            :|||||||||.:||:|||||||||||..||..|.|:|..|..||:::|.|.|:|.||.:.||||:
Zfish   251 VGGLSGSTTVNITLTDVNDNPPKFPQKNYQVFVPESAQVGKPVGKIKANDEDIGINAEIKYSILN 315

Human   301 GEGSEAFSISTDLQGRDGLLTVRKPLDFESQRSYSFRVEATNTLIDPAYLRRGPFKDVASVRVAV 365
            .||:..||||||...|:|::|:||||::|.::.||..:.|.||.:||.|...|.|||.|::::.|
Zfish   316 PEGAAVFSISTDKDTREGVITLRKPLNYEKKKQYSLHISAENTHVDPRYSYLGSFKDDATLKITV 380

Human   366 QDAPEPPAFTQAAYHLTVPENKAPGTLVGQISAADLDSPASPIRYSILPHSDPERCFSIQPEEGT 430
            .|..|||.|:...|.:.|.||...||.||.::|.|.||..||:||.|....|.|..|.|:...|.
Zfish   381 GDVDEPPLFSMDYYIMEVYENARVGTEVGAVTARDPDSKNSPVRYFIERREDKEVYFDIESISGV 445

Human   431 IHTAAPLDREARAWHNLTVLATELGWSWGPERGWVPLLVAEWSAPAAPPQRSPVGSAVGIPQDSS 495
            |.|...||||...|||:||:|||                                      :|:.
Zfish   446 IRTTQLLDREDTPWHNITVMATE--------------------------------------EDNP 472

Human   496 AQASRVQVAIQTLDENDNAPQLAEPYDTFVCDSAAPGQLIQVIRALDRDEVGNSSHVSFQGPLGP 560
            :..|.|.|.:|.||.|||.|::....:..:|:....|.:||.|.|:|:|:..|....||..|.|.
Zfish   473 SLQSHVPVTVQVLDVNDNPPKINTEDEIIICEGTRAGHVIQTITAVDKDDFANGKGFSFSFPGGV 537

Human   561 DA--NFTVQDNRDGSASLLLPSRPAPPRHAPYLVPIELWDWGQPALSSTATVTVSVCRCQPDGSV 623
            .|  |||::||.|.:||:....|........|.:.:.:||.|:|.||||.|:|:.||.||....:
Zfish   538 SANPNFTIKDNEDSTASITARRRFHRLTQELYELAVVVWDDGEPVLSSTGTLTLRVCSCQRGTRL 602

Human   624 ASCWPEAHLSAAGLSTGALLAIITCVGALLALVVLFVALRRQKQEALMVLEEEDVRENIITYDDE 688
            ..|..||.||:||||||||:||:.|:..|||:|:||:.|||.|:|.| ::.|||:|||::|||||
Zfish   603 KICQSEAFLSSAGLSTGALIAILLCILILLAIVILFITLRRSKKEPL-IISEEDIRENVVTYDDE 666

Human   689 GGGEEDTEAFDITALQNPDGAAPPAPGPPARRDVLP---RARVSRQP-----RPPG-----PADV 740
            ||||||||||||.||:||..|..    ...||||.|   |...||:|     .|..     ..||
Zfish   667 GGGEEDTEAFDIIALRNPAAAEE----LKFRRDVQPECIRPWSSRRPIRSRLSPSSLDIDEETDV 727

Human   741 AQLLALRLREADEDPGVPPYDSVQVYGYEGRGSSCGSLSSLGSGSEAGGAPG-----PAEPLDDW 800
            .:.:..|:.|||:|..||||||:|.|.|||:||..||:|||||       ||     ....||||
Zfish   728 GEFIKQRVSEADQDTSVPPYDSLQTYAYEGQGSPAGSISSLGS-------PGAHSDLDYNSLDDW 785

Human   801 GPLFRTLAELYG 812
            ||.|..:|||||
Zfish   786 GPKFEKIAELYG 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDH24NP_071923.2 CA 70..148 CDD:214520 51/77 (66%)
Cadherin_repeat 154..255 CDD:206637 68/100 (68%)
Cadherin_repeat 264..368 CDD:206637 48/103 (47%)
Cadherin_repeat 379..513 CDD:206637 44/133 (33%)
CA_like 521..615 CDD:481204 34/95 (36%)
CADH_Y-type_LIR 751..812 CDD:460041 35/65 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..800 16/36 (44%)
LOC101886358XP_021336085.2 None

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