DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZMAT3 and zmat3

DIOPT Version :9

Sequence 1:NP_001362753.1 Gene:ZMAT3 / 64393 HGNCID:29983 Length:289 Species:Homo sapiens
Sequence 2:XP_005155912.1 Gene:zmat3 / 561535 ZFINID:ZDB-GENE-130530-881 Length:361 Species:Danio rerio


Alignment Length:294 Identity:185/294 - (62%)
Similarity:205/294 - (69%) Gaps:19/294 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    10 PPP---KQPSPSPPMSVATRSTGTLQLPPQKPFGQEASL-PLAGEEEL-SKGGEQDCALEELCKP 69
            |||   ..|.|.|..:...:....|||||..|......: |...||:. :...:|:..|||||||
Zfish    71 PPPVMMPDPLPFPHCTPPIKPPPHLQLPPNPPLPPPPVISPKPPEEDAQAVAADQEATLEELCKP 135

Human    70 LYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAA-TPVVPVPPQMGS 133
            |||||||||||||||||||||||||.|||||:||.:..|||..:..||||.: .|....|....:
Zfish   136 LYCKLCNVTLNSAQQAQAHYQGKNHSKKLRNFYAGSQQPPPITIPEVVEPVSQQPSATTPTDSAN 200

Human   134 -------FKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSESSEL 191
                   .|...|||||||||||||||||||||||||||||||||||||||||||.|:.|.....
Zfish   201 ATANQPLTKGASRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQQNATSSDLSD 265

Human   192 GQRRARKEGNEFKMMPNRRNMYTVQNNSA--GPYFNPRSRQRIPRDLAMCVTPSGQFYCSMCNVG 254
            .|||.||||.|:::|.|||    .|.|:|  |||:|||.||||||||||||||||||||||||.|
Zfish   266 TQRRPRKEGYEYRLMKNRR----AQFNTAMPGPYYNPRPRQRIPRDLAMCVTPSGQFYCSMCNSG 326

Human   255 AGEEMEFRQHLESKQHKSKVSEQRYRNEMENLGY 288
            |.||.|||.|||||||||:|||||||:|||||||
Zfish   327 ASEEAEFRLHLESKQHKSRVSEQRYRSEMENLGY 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZMAT3NP_001362753.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 12/34 (35%)
ZnF_U1 67..101 CDD:197732 32/33 (97%)
C2H2 Zn finger 72..94 CDD:275371 21/21 (100%)
ZnF_U1 144..177 CDD:197732 32/32 (100%)
C2H2 Zn finger 149..171 CDD:275371 21/21 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..201 10/20 (50%)
ZnF_U1 243..277 CDD:197732 28/33 (85%)
zmat3XP_005155912.1 ZnF_U1 133..167 CDD:197732 32/33 (97%)
C2H2 Zn finger 138..160 CDD:275371 21/21 (100%)
ZnF_U1 218..251 CDD:197732 32/32 (100%)
C2H2 Zn finger 223..245 CDD:275371 21/21 (100%)
ZnF_U1 315..349 CDD:197732 28/33 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194326875
Domainoid 1 1.000 90 1.000 Domainoid score I27998
eggNOG 1 0.900 - - E1_28PGH
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32545
Inparanoid 1 1.050 343 1.000 Inparanoid score I8817
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565630at2759
OrthoFinder 1 1.000 - - FOG0010997
OrthoInspector 1 1.000 - - oto44699
orthoMCL 1 0.900 - - OOG6_111409
Panther 1 1.100 - - LDO PTHR46786
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5774
SonicParanoid 1 1.000 - - X8570
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1818.290

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