DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRA2B and eIF4H2

DIOPT Version :10

Sequence 1:NP_004584.1 Gene:TRA2B / 6434 HGNCID:10781 Length:288 Species:Homo sapiens
Sequence 2:NP_651820.1 Gene:eIF4H2 / 43645 FlyBaseID:FBgn0039797 Length:459 Species:Drosophila melanogaster


Alignment Length:251 Identity:59/251 - (23%)
Similarity:99/251 - (39%) Gaps:51/251 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    39 SKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMST 103
            :...|:|.|..:|..:.:.:|..|...|....:|....:.:..|:|...|| |:|...:..|...
  Fly     2 ANRSSQRDREFNRDNTYNNNRDNRDHNRDNRDNRENRSNFQNYRNRDRDRD-RQRQVPTEPPFIA 65

Human   104 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFEN 168
               :|||...          ||    .:.|:.::||.: .:.:|.::.|:::...:|:.:|.||.
  Fly    66 ---YVGNLPK----------GL----VQGDVMKIFSDF-EVKNVRLIKDRETDEFKGYGYVEFET 112

Human   169 VDDAKEAKERANGMELD--GRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYD 231
            :...|.|......::||  ...:|:|.:..:|.:...|....|.|..|.         |::||  
  Fly   113 LAQLKSALNCNGRIKLDNFSAPLRIDIADHRRQNPGAPSGVGGAPPAGV---------GHERG-- 166

Human   232 DRDYYSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRR 287
                      ||.|.||...||...         :|||.|..||......|:..||
  Fly   167 ----------GGVGRGGSTGAANGN---------NPYYQRRNYRRDDSVGSHQFRR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRA2BNP_004584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 18/74 (24%)
RRM_TRA2 117..196 CDD:409798 17/80 (21%)
Linker 193..230 7/36 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 5/28 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 16/46 (35%)
eIF4H2NP_651820.1 RRM_SF 58..144 CDD:473069 21/103 (20%)

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