DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRA2B and msi

DIOPT Version :10

Sequence 1:NP_004584.1 Gene:TRA2B / 6434 HGNCID:10781 Length:288 Species:Homo sapiens
Sequence 2:NP_733108.2 Gene:msi / 43087 FlyBaseID:FBgn0011666 Length:634 Species:Drosophila melanogaster


Alignment Length:73 Identity:26/73 - (35%)
Similarity:42/73 - (57%) Gaps:6/73 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    98 HSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFA 162
            |:....|.|    :||......:|  |:|..|:..:::..||::||:.:..::.|||::|.|||.
  Fly   277 HA
TPKNRPR----QANKTKKIFVG--GVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFG 335

Human   163 FVYFENVD 170
            ||.|||.|
  Fly   336 FVTFENED 343

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
TRA2BNP_004584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 4/15 (27%)
RRM_TRA2 117..196 CDD:409798 21/54 (39%)
Linker 193..230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288