Sequence 1: | NP_004584.1 | Gene: | TRA2B / 6434 | HGNCID: | 10781 | Length: | 288 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_733041.2 | Gene: | Saf-B / 42958 | FlyBaseID: | FBgn0039229 | Length: | 928 | Species: | Drosophila melanogaster |
Alignment Length: | 320 | Identity: | 70/320 - (21%) |
---|---|---|---|
Similarity: | 116/320 - (36%) | Gaps: | 73/320 - (22%) |
- Green bases have known domain annotations that are detailed below.
Human 13 ESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
Human 78 HRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYG 142
Human 143 PIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS--------ITKRP 199
Human 200 HTPTPGIYMGRPTYGSSRRRDYYDRGYDRGY---------DDRDYYSRSYRGGGGGG-------- 247
Human 248 -------------------GGWRAAQDRDQIYRRRSPSPYYS-RGGYRSRSRSRSYSPRR 287 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TRA2B | NP_004584.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..114 | 19/100 (19%) | |
RRM_TRA2 | 117..196 | CDD:409798 | 24/86 (28%) | ||
Linker | 193..230 | 7/44 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 196..225 | 6/28 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 242..288 | 17/74 (23%) | |||
Saf-B | NP_733041.2 | SAP | 11..42 | CDD:280251 | |
RRM | 205..>394 | CDD:223796 | 43/186 (23%) | ||
RRM_SAFB_like | 313..386 | CDD:240863 | 23/84 (27%) | ||
SWIRM-assoc_1 | <588..618 | CDD:293104 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |