DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRA2B and Rox8

DIOPT Version :10

Sequence 1:NP_004584.1 Gene:TRA2B / 6434 HGNCID:10781 Length:288 Species:Homo sapiens
Sequence 2:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster


Alignment Length:162 Identity:43/162 - (26%)
Similarity:69/162 - (42%) Gaps:30/162 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   109 GNRANPDPNCCLGVF--GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDD 171
            ||:...|.:....:|  .||.......|||.|:.:|.|::..||.|..:.:|:|:|||.|....:
  Fly    84 GNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAE 148

Human   172 AKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYY 236
            |:.|.:..||..:..|.||.::|..|.|....|                  .:|..:|       
  Fly   149 AENAIQAMNGQWIGSRSIRTNWSTRKLPPPREP------------------SKGGGQG------- 188

Human   237 SRSYRGGGGGGGGWRAAQDR--DQIYRRRSPS 266
             ....||.|.|.|.:.:|..  :::|.:.||:
  Fly   189 -GGMGGGPGNGSGVKGSQRHTFEEVYNQSSPT 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRA2BNP_004584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 2/4 (50%)
RRM_TRA2 117..196 CDD:409798 26/80 (33%)
Linker 193..230 5/36 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 3/28 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 9/27 (33%)
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788
RRM2_TIA1_like 96..170 CDD:409789 25/73 (34%)
RRM_SF 221..292 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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