Protein Alignment TRA2B and rsp-8

DIOPT Version :9

• Sequence 1: NP_004584.1
• Gene: TRA2B / 6434
• HGNCID: 10781
• Length: 288
• Species: Homo sapiens
• Sequence 2: NP_001255142.1
• Gene: rsp-8 / 176613
• WormBaseID: WBGene00004705
• Length: 309
• Species: Caenorhabditis elegans
• Alignment Length: 256
• Identity: 113/256 - (44%)
• Similarity: 138/256 - (53%)
• Gaps: 27/256 - (10%)

Human    49 KSRSRSESRSRSRRSSRRHYTRSRSRSRS---HRRSRSRSYSRDYRRRH---SHSHSPMSTRRRH 107
            :|||.|.|:||||.:||   .||||.|:|   |||.|..|.||..|.|:   ..........|..
 Worm     4 RSRSNSRSQSRSRENSR---GRSRSASKSPVYHRRERESSRSRSPRARYGGGGGGGGGGGRGRNQ 65

Human   108 VGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDA 172
            ..:|.||.|:.|||||.||.||||:|||:||.::|.|....:|||:.|..||||.|:||..::||
 Worm    66 QYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDA 130

Human   173 KEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYY-----DRGYDRGYDD 232
            ..|:::....:|||.:||||||:|||.|:||||.|||....|.|.....:     ||..|||...
 Worm   131 TAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQYMGDRRGGGSSGGGRFGGGGGDRFNDRGSRG 195

Human   233 RDYYSRSYRGGGGGGGGWRAAQDRDQIY----------RRRSPSPYYSRGGYRSRSRSRSY 283
            .|.|....|||||||||.|........|          ||.||.   .|||:||......|
 Worm   196 GDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPD---RRGGFRSGGGGGGY 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TRA2B	NP_004584.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..114		28/70 (40%)
		RRM_TRA2	117..196	CDD:409798	41/78 (53%)
		Linker	193..230		19/41 (46%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	196..225		14/33 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	242..288		20/52 (38%)
rsp-8	NP_001255142.1	RRM_TRA2	77..154	CDD:240809	41/76 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	76	1.000	Domainoid score	I6299
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	175	1.000	Inparanoid score	I3100
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1524134at2759
OrthoFinder	1	1.000	-	-		FOG0001901
OrthoInspector	1	1.000	-	-		otm16110
orthoMCL	1	0.900	-	-		OOG6_103481
Panther	1	1.100	-	-	O	PTHR48034
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1765
SonicParanoid	1	1.000	-	-		X1620
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.000