| Sequence 1: | XP_016857548.1 | Gene: | COP1 / 64326 | HGNCID: | 17440 | Length: | 775 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001245503.1 | Gene: | wds / 53428 | FlyBaseID: | FBgn0040066 | Length: | 361 | Species: | Drosophila melanogaster |
| Alignment Length: | 316 | Identity: | 82/316 - (25%) |
|---|---|---|---|
| Similarity: | 147/316 - (46%) | Gaps: | 45/316 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Human 422 SVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVY-EYDTVIQDAVDIHYPENEM 485
Human 486 TCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASG 550
Human 551 SDDAKVKLWSTNLDNSVASIEAKAN-VCCVKFS------PSSRYHLAFGCADHCVHYYDLRNTKQ 608
Human 609 PIMVFKGHRKAVSYAKF-VSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEK-----NFVGLA 667
Human 668 SNGDYIACGSENNSLYLY----------YKGLSKTLLTFKFDTVKSVLDKDRKEDD 713 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| COP1 | XP_016857548.1 | RING-HC_COP1 | 132..177 | CDD:319418 | |
| PLN00181 | <240..725 | CDD:177776 | 82/316 (26%) | ||
| WD40 repeat | 491..528 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 535..571 | CDD:293791 | 9/35 (26%) | ||
| WD40 repeat | 576..614 | CDD:293791 | 8/43 (19%) | ||
| WD40 repeat | 620..659 | CDD:293791 | 17/39 (44%) | ||
| WD40 repeat | 663..685 | CDD:293791 | 8/21 (38%) | ||
| wds | NP_001245503.1 | WD40 | 64..358 | CDD:238121 | 78/309 (25%) |
| WD40 repeat | 75..112 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 118..154 | CDD:293791 | 12/36 (33%) | ||
| WD40 repeat | 159..195 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 202..237 | CDD:293791 | 7/41 (17%) | ||
| WD40 repeat | 244..280 | CDD:293791 | 15/35 (43%) | ||
| WD40 repeat | 288..325 | CDD:293791 | 9/38 (24%) | ||
| WD40 repeat | 331..357 | CDD:293791 | 3/21 (14%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||