DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COP1 and CG6724

DIOPT Version :9

Sequence 1:XP_016857548.1 Gene:COP1 / 64326 HGNCID:17440 Length:775 Species:Homo sapiens
Sequence 2:NP_609452.1 Gene:CG6724 / 34488 FlyBaseID:FBgn0032298 Length:420 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COP1XP_016857548.1 RING-HC_COP1 132..177 CDD:319418
PLN00181 <240..725 CDD:177776
WD40 repeat 491..528 CDD:293791
WD40 repeat 535..571 CDD:293791
WD40 repeat 576..614 CDD:293791
WD40 repeat 620..659 CDD:293791
WD40 repeat 663..685 CDD:293791
CG6724NP_609452.1 NLE 10..75 CDD:285380
WD40 105..>411 CDD:225201
WD40 105..408 CDD:238121
WD40 repeat 198..250 CDD:293791
WD40 repeat 255..288 CDD:293791
WD40 repeat 296..333 CDD:293791
WD40 repeat 340..378 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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