DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX17 and Sox100B

DIOPT Version :10

Sequence 1:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:436 Identity:121/436 - (27%)
Similarity:174/436 - (39%) Gaps:117/436 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    50 ANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEK 114
            |::.||..     :.:..|:||||||||||:..|:.:::|.|.|.|:||||.|||.||.|..::|
  Fly    64 ASAKAPTD-----RKKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDK 123

Human   115 RPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRV-------EGGFLHGLAEPQAAALGPEGG 172
            :||:|.||:||:.|.|:||:|||:|||:|     .||       ||| ..|.....:|.:|..|.
  Fly   124 KPFMEFAEKLRMTHKQEHPDYKYQPRRKK-----ARVLPSQQSGEGG-SPGPEMTLSATMGSSGK 182

Human   173 RVAMDGLGLQFPEQGFPA------GPPLLPPHMGGHYRD--------------C------QSLGA 211
            ..:.:..|.:...:|..|      ...:...::|.:..|              |      |||..
  Fly   183 PRSSNSNGQRRAGKGNAAADLGSCASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIE 247

Human   212 PPLDGYPLPTPDTSPLDGVDPDPA--FFAAPMPGDCPAAGTYS--YAQVSDYAGPPEPPAGPMHP 272
            ..||.   |....|.:..:.| ||  :..||......||...|  ..|:|      ||.|.    
  Fly   248 TGLDS---PCSTASSMSSLTP-PATPYNVAPSNAKASAANNPSLLLRQLS------EPVAN---- 298

Human   273 RLGPEPAGPSIPGLLAPPSALHVYYGAMGSPG---------AGGGRGFQMQPQHQHQHQHQHHPP 328
                  ||... |:|......:|..|.:...|         .|||.|.:|        ....:..
  Fly   299 ------AGDGY-GVLLEAGREYVAIGEVNYQGQSAGVQSGAEGGGAGQEM--------DFLENIN 348

Human   329 GPG-----QPSPPPEALPCRDG---TDPSQPAELL------------GEVDRTEFEQYLHFVCKP 373
            |.|     :.|.|..:.|...|   |:..|..:.|            .::|..|.:||......|
  Fly   349 GYGGYTGSRVSYPAYSYPANGGHFATEEQQQQQALQASEALNYKPAAADIDPKEIDQYFMDQMLP 413

Human   374 EMGLPYQGHDSGVNLP-------DSHGAISSVVSDASS----AVYY 408
            .....:..|...::.|       :|..::||..|.|||    |.||
  Fly   414 MTQHHHPHHTHPLHHPLHHSPPLNSSASLSSACSSASSQQPVAEYY 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66 3/15 (20%)
HMG-box_SoxF_SOX17 62..142 CDD:438850 43/79 (54%)
Sox17_18_mid 203..253 CDD:463454 17/73 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286 6/29 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352 13/54 (24%)
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 361..369 3/7 (43%)
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 42/73 (58%)
Blue background indicates that the domain is not in the aligned region.

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