DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOX17 and TFAM

DIOPT Version :10

Sequence 1:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens
Sequence 2:NP_732527.1 Gene:TFAM / 42433 FlyBaseID:FBgn0038805 Length:284 Species:Drosophila melanogaster


Alignment Length:132 Identity:30/132 - (22%)
Similarity:60/132 - (45%) Gaps:27/132 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSW-----------KALTLAEKRPFVE- 119
            |.::|:..:..:.:::|.:|...||.:...|:.:.|.|:|           :|....:::.:|| 
  Fly    77 RPKKPLTPYFRFMREQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEE 141

Human   120 ---------EAERLRVQHM-QDHPNYKYRPRRRKQVKRL---KRVEGGFLHGLAEPQAAALGPEG 171
                     |.:|..::.: ||..:.|.|.:.||:||.|   |:....||..:|..:...  |:|
  Fly   142 RTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASERINT--PQG 204

Human   172 GR 173
            .:
  Fly   205 DK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66
HMG-box_SoxF_SOX17 62..142 CDD:438850 19/96 (20%)
Sox17_18_mid 203..253 CDD:463454
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352
9aaTAD. /evidence=ECO:0000269|PubMed:34342803 361..369
TFAMNP_732527.1 HMG-box_SF 78..138 CDD:469606 10/59 (17%)
HMG-box_SF 168..263 CDD:469606 13/41 (32%)
Blue background indicates that the domain is not in the aligned region.

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