Protein Alignment SRSF7 and PAB1

DIOPT Version :9

• Sequence 1: NP_001026854.1
• Gene: SRSF7 / 6432
• HGNCID: 10789
• Length: 238
• Species: Homo sapiens
• Sequence 2: NP_011092.1
• Gene: PAB1 / 856912
• SGDID: S000000967
• Length: 577
• Species: Saccharomyces cerevisiae
• Alignment Length: 92
• Identity: 26/92 - (28%)
• Similarity: 42/92 - (45%)
• Gaps: 9/92 - (9%)

Human     6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARN----PPGFAFVEFEDPRDAEDAVRG 66
            |..|...:::.||........|...||.:|.:.:..||.:    ..||.||.||:...|::|:..
Yeast   121 RKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDA 185

Human    67 LDGKVICGSRVRVELSTGMPRRSRFDR 93
            |:|.::.|..:.|     .|..||.:|
Yeast   186 LNGMLLNGQEIYV-----APHLSRKER 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SRSF7	NP_001026854.1	RRM_SRSF7	12..88	CDD:410050	21/79 (27%)
		Sufficient for interaction with NXF1	81..98		4/13 (31%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	123..238
		6 X 8 AA repeats of R-R-S-R-S-X-S-X	153..226
PAB1	NP_011092.1	PABP-1234	38..559	CDD:130689	26/92 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910