DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF7 and B52

DIOPT Version :10

Sequence 1:NP_001026854.1 Gene:SRSF7 / 6432 HGNCID:10789 Length:238 Species:Homo sapiens
Sequence 2:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster


Alignment Length:350 Identity:120/350 - (34%)
Similarity:146/350 - (41%) Gaps:129/350 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    11 TKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 75
            ::||||.|..|..:.:|||.|..||..|.:.|..   |:.||||||.|||:|||..|:||.:.|.
  Fly     4 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGKELLGE 65

Human    76 RVRVELSTGMPRRSRFDR------------------------------PPARRPF---------- 100
            ||.||.:.|..|.|..||                              ||.|..:          
  Fly    66 RVVVEPARGTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSSR 130

Human   101 ----DPNDRCYECGEKGHYAYDCHRY--------------------------------------- 122
                |..|...:.||. .|| |.|:.                                       
  Fly   131 VSWQDLKDYMRQAGEV-TYA-DAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRR 193

Human   123 --------------SRRRRSRSRSRSHSRSRGRR------YSRSRSRSRGRRSRSASPRRSRSIS 167
                          ||...|||||||..|||.||      .|||||:|||.||:|.||.:|||.|
  Fly   194 GGRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRS 258

Human   168 ---------LRRSRSASLRRSRSGSIKGSRYFQSPSR------SRSRSRSISRPRSSRSKSRSPS 217
                     :.:|:|.|..|:||.|.|..|..:|.||      |||||||.|..|.|||:.||.|
  Fly   259 RSRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSAS 323

Human   218 PK-----RSRSPSGSPRR-SASPER 236
            .:     ||||.|.||:. :|||:|
  Fly   324 AENKSRSRSRSRSASPKNGNASPDR 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF7NP_001026854.1 RRM_SRSF7 12..88 CDD:410050 36/75 (48%)
Sufficient for interaction with NXF1 81..98 7/46 (15%)
zf-CCHC 104..119 CDD:395050 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..238 68/140 (49%)
6 X 8 AA repeats of R-R-S-R-S-X-S-X 153..226 40/92 (43%)
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 35/71 (49%)
RRM2_SRSF4_like 120..191 CDD:410012 8/72 (11%)

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