| Sequence 1: | NP_001026854.1 | Gene: | SRSF7 / 6432 | HGNCID: | 10789 | Length: | 238 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
| Alignment Length: | 260 | Identity: | 72/260 - (27%) |
|---|---|---|---|
| Similarity: | 104/260 - (40%) | Gaps: | 64/260 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Human 4 YGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Human 69 GKVICGSRVRV-----ELSTGMPRRS-RFDRPP-------ARRP-FDPNDRCYECGEKGHYAYDC 119
Human 120 HRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSI 184
Human 185 KGS------------RYFQSPSRSRSR-SRSISR-PRSSRSKSRSPSPKRSRSPSG----SPRRS 231
Human 232 231 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SRSF7 | NP_001026854.1 | RRM_SRSF7 | 12..88 | CDD:410050 | 20/80 (25%) |
| Sufficient for interaction with NXF1 | 81..98 | 4/24 (17%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 123..238 | 37/127 (29%) | |||
| 6 X 8 AA repeats of R-R-S-R-S-X-S-X | 153..226 | 25/86 (29%) | |||
| nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | |
| RRM1_Spen | 98..175 | CDD:240754 | |||
| RRM2_Spen | 312..390 | CDD:240755 | 1/1 (100%) | ||
| RRM3_Spen | 397..467 | CDD:240756 | 17/70 (24%) | ||
| SPOC | 630..789 | CDD:311609 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||