Sequence 1: | NP_006266.2 | Gene: | SRSF6 / 6431 | HGNCID: | 10788 | Length: | 344 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
Alignment Length: | 202 | Identity: | 40/202 - (19%) |
---|---|---|---|
Similarity: | 77/202 - (38%) | Gaps: | 38/202 - (18%) |
- Green bases have known domain annotations that are detailed below.
Human 4 VYIGRLSYNVREKDIQRFFSGYGRLLEVDL--------KNGYGFVEFEDSRDADDAVYELNGKEL 60
Human 61 CGERVI-----VEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKY---------GPPVRTEY- 110
Human 111 -----RLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTE 170
Human 171 INGRNIR 177 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SRSF6 | NP_006266.2 | RRM1_SRSF6 | 1..72 | CDD:410009 | 17/80 (21%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 75..103 | 6/36 (17%) | |||
RRM2_SRSF6 | 110..182 | CDD:410159 | 13/74 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 176..344 | 0/2 (0%) | |||
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 37/186 (20%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | |||
RRM2_TIA1_like | 96..170 | CDD:240799 | 17/73 (23%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 14/77 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |