DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SRSF5 and SF2

DIOPT Version :10

Sequence 1:NP_008856.2 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens
Sequence 2:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster


Alignment Length:252 Identity:99/252 - (39%)
Similarity:131/252 - (51%) Gaps:33/252 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG--FGFVEFEDPRDADDAVYELDGKELCS 64
            ||:::|.|.|..|.||::..|..:|::..:|||  ||  |.||||||.|||||||...||.:...
  Fly     7 CRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71

Human    65 ERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMR 129
            .|:.:|..|....|....|..:||......|...|..|..|::.|::|..|.:..|||||||.||
  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMR 136

Human   130 QAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRK-----IKLIEGSKRHSR---- 185
            :||:|.|||.:  |...|||||..:.|:|.||:||........:     |::.|.|..:.|    
  Fly   137 EAGDVCFADTY--KDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGG 199

Human   186 --------------SRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227
                          ||. |.|||:||.|   ||.|.|...:||..|.:|.|||||:|
  Fly   200 GGSGGGGGGSGGGGSRDYRDRSRSRSFS---SRPRRRGTPTYSPVRRQSYSRSRSRS 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF5NP_008856.2 RRM1_SRSF5 5..74 CDD:410008 32/72 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 8/31 (26%)
RRM2_SRSF5 99..179 CDD:410158 34/84 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272 27/73 (37%)
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 33/72 (46%)
RRM2_SRSF1_like 115..188 CDD:410013 31/74 (42%)

Return to query results.
Submit another query.