DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF5 and B52

DIOPT Version :10

Sequence 1:NP_008856.2 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens
Sequence 2:NP_788671.2 Gene:B52 / 41670 FlyBaseID:FBgn0004587 Length:355 Species:Drosophila melanogaster


Alignment Length:344 Identity:178/344 - (51%)
Similarity:210/344 - (61%) Gaps:73/344 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSE 65
            |.|.||::|.|....||:|:|||||||||.|||.:|.|:|||||||.||||||||||:||||..|
  Fly     1 MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 65

Human    66 RVTIEHARARSRGGRGRGRYSDRFSSRR-------------PRNDRRNAPPVRTENRLIVENLSS 117
            ||.:|.||..:||. .|.||.||:..||             .|:..|..||:|||.|||||||||
  Fly    66 RVVVEPARGTARGS-NRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPLRTEYRLIVENLSS 129

Human   118 RVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE---- 178
            |||||||||:||||||||:||||:.:.|||||||||..|:|.|||||...|:|||:|.|:|    
  Fly   130 RVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVEDRRG 194

Human   179 -------GSKR--------HSRSRSRSRSRTRSSSRSRSRSRSRSR------------------- 209
                   ||.|        .||||||.|||:|.||.|||:|||||:                   
  Fly   195 GRSGGGGGSGRGRSRSSSSRSRSRSRRRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSR 259

Human   210 --------------KSYSRSRSR-------SRSRSRSKSRSVSRSPVPEKSQKRGSSSRSKSPAS 253
                          ||:||:|||       |||||||.|:..|||....||..|.|.||.:|.::
  Fly   260 SRSNKSRDVSKSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRSKSIHRDSRSRDRSASA 324

Human   254 VDRQRSRSRSRSRSVDSGN 272
            .::.||||||||.|..:||
  Fly   325 ENKSRSRSRSRSASPKNGN 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF5NP_008856.2 RRM1_SRSF5 5..74 CDD:410008 47/68 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 14/44 (32%)
RRM2_SRSF5 99..179 CDD:410158 59/90 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272 60/156 (38%)
B52NP_788671.2 RRM1_SRSF4_like 5..74 CDD:409774 47/68 (69%)
RRM2_SRSF4_like 120..191 CDD:410012 52/70 (74%)

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