DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF5 and Rbp1

DIOPT Version :10

Sequence 1:NP_008856.2 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens
Sequence 2:NP_731510.1 Gene:Rbp1 / 41294 FlyBaseID:FBgn0260944 Length:144 Species:Drosophila melanogaster


Alignment Length:128 Identity:48/128 - (37%)
Similarity:66/128 - (51%) Gaps:13/128 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKELCSE 65
            |:|::|.|..:|.:.::|..|..||.:|::.:.|   ||.||||||.|||:||...|||...|..
  Fly    11 CKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGT 75

Human    66 RVTIEHARARSRG-GRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLI-----VENLSSRVSWQ 122
            |:.:|.:..|||. .||.|..|.|..|.|    .|..|..||.:...     :.||..:.|.|
  Fly    76 RIRVEMSSGRSRDRRRGEGGSSGRSGSGR----YRITPSARTTSTATSSFYNINNLQQQPSSQ 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF5NP_008856.2 RRM1_SRSF5 5..74 CDD:410008 29/71 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 12/32 (38%)
RRM2_SRSF5 99..179 CDD:410158 8/29 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272
Rbp1NP_731510.1 RRM_SRSF3_like 12..81 CDD:409808 28/68 (41%)
Blue background indicates that the domain is not in the aligned region.

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