Protein Alignment SRSF5 and Caper

DIOPT Version :10

• Sequence 1: NP_008856.2
• Gene: SRSF5 / 6430
• HGNCID: 10787
• Length: 272
• Species: Homo sapiens
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 191
• Identity: 48/191 - (25%)
• Similarity: 82/191 - (42%)
• Gaps: 41/191 - (21%)

Human     6 VFIGRLNPAAREKDVERFFKGYGRIRDIDL------KR--GFGFVEFEDPRDADDAVYELDGKEL 62
            ||..:|:...|.:|:|.||...|::||:.|      ||  |..::||:||.....|: .|.|:.|
  Fly   239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALAL-GLSGQRL 302

Human    63 CSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTEN------RLIVENLSSRVSW 121
            ....:.::|.:|.                   :|..:||.|.....      ||.|.:|...::.
  Fly   303 LGVPIMVQHTQAE-------------------KNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITE 348

Human   122 QDLKDFMRQAGEVTF------ADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL 176
            ..|:......|::..      .:..|.| ..|.:.:.:..|.|.|:|:|:|.|:.||.:|:
  Fly   349 DMLRGIFEPFGKIDAIQLIMDTETGRSK-GYGFITYHNADDAKKALEQLNGFELAGRLMKV 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SRSF5	NP_008856.2	RRM1_SRSF5	5..74	CDD:410008	24/75 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	73..105		5/31 (16%)
		RRM2_SRSF5	99..179	CDD:410158	22/90 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	174..272		1/3 (33%)
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	48/191 (25%)